Parental gene: | ITGB3BP, ENSCJAG00000016555 |
| Aliases: | None |
| Description: | integrin beta 3 binding protein (beta3-endonexin) [Source:HGNC Symbol;Acc:6157] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:98868242..98959373(-) |
>ENSCJAG00000016555
ATGCCTGTTAAAAGATCACTGAAATTGGATGGCCTGTTAAAAGAAGATTCATTTGATCCTTCAAAAATCACAAGGAAGAA
AAGTATTATAATTTACTCTCCAACAACTGGAACTTGTCAAATGAGTCTATTTGCTTCTCCCACAAGCTCTAAAGAACAAG
AGTACGGAAATGGACTATCAAATGAAAAGAGAAAAAAATTGAATCACCCCAGTTTAACTGAAAGCAAAGAATCTACAACA
AAAGACAATGATGAATTCATGATGTTGCTATCTAAAGTTGAGAAATTGTCAGAAGAAATCGTGGAGATAATGCAAAATTT
AAGTAGTATACAGGCTTTGGAGGGCAGTAGAGAGCTAGAAAATCTCATTGGAATCTCCTGTGGATCACGTTTCTTAAAAA
GAGAAATGAAGAAAACCAAAGAACTAATGACAAAAGTAACTAAACGAAAACTGTTTGAAAAGAGTTCAGTACTTCCTCAC
AGAGAATCATGTCATCTTGACAGCTATGAATTCCTTAAAGCCATTTTAAACTGA
ATGCCTGTTAAAAGATCACTGAAATTGGATGGCCTGTTAAAAGAAGATTCATTTGATCCTTCAAAAATCACAAGGAAGAA
AAGTATTATAATTTACTCTCCAACAACTGGAACTTGTCAAATGAGTCTATTTGCTTCTCCCACAAGCTCTAAAGAACAAG
AGTACGGAAATGGACTATCAAATGAAAAGAGAAAAAAATTGAATCACCCCAGTTTAACTGAAAGCAAAGAATCTACAACA
AAAGACAATGATGAATTCATGATGTTGCTATCTAAAGTTGAGAAATTGTCAGAAGAAATCGTGGAGATAATGCAAAATTT
AAGTAGTATACAGGCTTTGGAGGGCAGTAGAGAGCTAGAAAATCTCATTGGAATCTCCTGTGGATCACGTTTCTTAAAAA
GAGAAATGAAGAAAACCAAAGAACTAATGACAAAAGTAACTAAACGAAAACTGTTTGAAAAGAGTTCAGTACTTCCTCAC
AGAGAATCATGTCATCTTGACAGCTATGAATTCCTTAAAGCCATTTTAAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .31 RPM |
| SRP051959_skeletal_muscle | 0 .96 RPM |
| SRP051959_lymph_node | 2 .97 RPM |
| SRP051959_lung | 1 .72 RPM |
| SRP051959_liver | 1 .15 RPM |
| SRP051959_kidney | 1 .62 RPM |
| SRP051959_heart | 1 .09 RPM |
| SRP051959_colon | 2 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000030710 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028549 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009116 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007480 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2618 | 83.09 | 76.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3850 | 84.56 | 76.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3991 | 83.94 | 76.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016555 retrocopies