Parental gene: | CLPP, ENSCJAG00000016699 |
| Aliases: | None |
| Description: | ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) [Source:HGNC Symbol;Acc:2084] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:6089371..6096589(+) |
>ENSCJAG00000016699
ATGTGGCCCGGAATATTGGTGGGGGGGGGCCGGGTGGCGGCAGGCAGGTACCCCGCGCTGGGGCTTCGCCTCGCCTCTCG
CTTTGCAGCGCAGCGGACGCCCCAGAGCGGCCCGGCCCTGCAGCGAAGCCTGCACGTGACGGCGGCCCGAGCTCTCCCGC
TCATTCCCATCGTGGTGGAGCAGACGGGTCGCGGGGAACGCGCCTATGACATCTACTCGCGGCTGCTGCGGGAGCGCATC
GTGTGCGTCATGGGCCCGATAGATGACAGCGTTGCCAGCCTGGTTATTGCACAGCTCCTCTTCCTGCAATCCGAGAGCAA
CAAGAAGCCCATCCACATGTACATCAACAGCCCTGGTGGTGTGGTGACCGCGGGCCTGGCCATCTACGACACGATGCAGT
ATATCCTCAACCCAATCTGCACATGGTGCGTGGGCCAGGCCGCCAGCATGGGCTCCCTGCTTCTCGCCGCCGGCAGCCCA
GGCATGCGCCACTCGCTTCCCAACTCCCGCATTATGATCCACCAGCCCTCAGGGGGCGCCCGGGGCCAAGCCACAGACAT
TGCCATCCAGGCAGAGGAGATCATGAAGCTGAAGAAACAGCTTTACAACATCTACGCGAAGCACACCAAACAGAGCCTGC
AGGTGATCGAGTCGGCCATGGAGAGGGACCGCTACATGAGCCCCATGGAGGCCCAGGAGTTCGGCATCTTAGACAAGGTT
CTCGTCCACCCTCCCCAGGACGGTGAAGATGAGCCCACGCTGGTGGAGAAGGAGCCTGTAGCAGCAGCGCCGACAGCAGA
CCCTGTCCCAGCAAGCACCTGA
ATGTGGCCCGGAATATTGGTGGGGGGGGGCCGGGTGGCGGCAGGCAGGTACCCCGCGCTGGGGCTTCGCCTCGCCTCTCG
CTTTGCAGCGCAGCGGACGCCCCAGAGCGGCCCGGCCCTGCAGCGAAGCCTGCACGTGACGGCGGCCCGAGCTCTCCCGC
TCATTCCCATCGTGGTGGAGCAGACGGGTCGCGGGGAACGCGCCTATGACATCTACTCGCGGCTGCTGCGGGAGCGCATC
GTGTGCGTCATGGGCCCGATAGATGACAGCGTTGCCAGCCTGGTTATTGCACAGCTCCTCTTCCTGCAATCCGAGAGCAA
CAAGAAGCCCATCCACATGTACATCAACAGCCCTGGTGGTGTGGTGACCGCGGGCCTGGCCATCTACGACACGATGCAGT
ATATCCTCAACCCAATCTGCACATGGTGCGTGGGCCAGGCCGCCAGCATGGGCTCCCTGCTTCTCGCCGCCGGCAGCCCA
GGCATGCGCCACTCGCTTCCCAACTCCCGCATTATGATCCACCAGCCCTCAGGGGGCGCCCGGGGCCAAGCCACAGACAT
TGCCATCCAGGCAGAGGAGATCATGAAGCTGAAGAAACAGCTTTACAACATCTACGCGAAGCACACCAAACAGAGCCTGC
AGGTGATCGAGTCGGCCATGGAGAGGGACCGCTACATGAGCCCCATGGAGGCCCAGGAGTTCGGCATCTTAGACAAGGTT
CTCGTCCACCCTCCCCAGGACGGTGAAGATGAGCCCACGCTGGTGGAGAAGGAGCCTGTAGCAGCAGCGCCGACAGCAGA
CCCTGTCCCAGCAAGCACCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .55 RPM |
| SRP051959_skeletal_muscle | 6 .57 RPM |
| SRP051959_lymph_node | 4 .18 RPM |
| SRP051959_lung | 3 .43 RPM |
| SRP051959_liver | 7 .34 RPM |
| SRP051959_kidney | 6 .15 RPM |
| SRP051959_heart | 4 .19 RPM |
| SRP051959_colon | 3 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000006284 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007981 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000005576 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2380 | 79.74 | 55.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016699 retrocopies