Parental gene: | clpp, ENSXETG00000005576 |
| Aliases: | None |
| Description: | ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog [Source:Jamboree;Acc:XB-GENE-969408] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173285.1:203210..210380(+) |
>ENSXETG00000005576
TTCCACCCACACGTTTCCCTTAGGGCCCTACAACAGTGCCCTCTATACCCTCCCCTAACCCCAGACATGGCAGCTGCTTT
CCCATTTTTCAATAAACGAATCTGTGCGCTGGCCCAGCTCAGAAATGTGCACCGCGGCCCTCCAGTGCTTTCTCCTCTCG
TCCCTATTGTCGTGGAGCAGACGGGCCGTGGTGAGAGAGCATACGATATATACTCCAGGCTACTGCGAGAGCGCATCATC
TGCGTGATGGGACCAATTGACGACTCCTTGTCCAGCCTTGTGGTTGCACAGCTGCTGTTCCTGCAGTCAGAGAGCAATAA
GAAGCCTATACACATGTACATCAATAGCCCAGGGGGCTCCGTTACAGCCGGCTTAGCCATATATGACACAATGCAGTACA
TTCTGAATCCCATATGTACATGGTGCGTGGGACAAGCAGCGAGCATGGGGTCCCTACTTCTGGCTGCTGGATCCAGCGGG
ATGAGACACTCTCTGCCAAACTCCAGAATCATGATCCACCAGCCCTCTGGGGGAGCCAGGGGTCAGGCCACAGACATTGC
TATCCAAGCAGAAGAAATCCTGAAGCTAAAGAAGCAGATTAATGAAATTTACGCAAAACACACGCGTCAGCCGCTCTCTG
TTATTGAGTCAGTAATGGAGAGGGATCGATACATGAGCCCTACAGAAGCCCAGGAATTTGGAATTCTGGACAAGGTATTG
GTGCACCCCCCTCAAGATGGCGAGGACGAACCAGAGCTGGTCATAAAGAAGGAGAACCAGACACCCCCAACTGAACCCTA
G
TTCCACCCACACGTTTCCCTTAGGGCCCTACAACAGTGCCCTCTATACCCTCCCCTAACCCCAGACATGGCAGCTGCTTT
CCCATTTTTCAATAAACGAATCTGTGCGCTGGCCCAGCTCAGAAATGTGCACCGCGGCCCTCCAGTGCTTTCTCCTCTCG
TCCCTATTGTCGTGGAGCAGACGGGCCGTGGTGAGAGAGCATACGATATATACTCCAGGCTACTGCGAGAGCGCATCATC
TGCGTGATGGGACCAATTGACGACTCCTTGTCCAGCCTTGTGGTTGCACAGCTGCTGTTCCTGCAGTCAGAGAGCAATAA
GAAGCCTATACACATGTACATCAATAGCCCAGGGGGCTCCGTTACAGCCGGCTTAGCCATATATGACACAATGCAGTACA
TTCTGAATCCCATATGTACATGGTGCGTGGGACAAGCAGCGAGCATGGGGTCCCTACTTCTGGCTGCTGGATCCAGCGGG
ATGAGACACTCTCTGCCAAACTCCAGAATCATGATCCACCAGCCCTCTGGGGGAGCCAGGGGTCAGGCCACAGACATTGC
TATCCAAGCAGAAGAAATCCTGAAGCTAAAGAAGCAGATTAATGAAATTTACGCAAAACACACGCGTCAGCCGCTCTCTG
TTATTGAGTCAGTAATGGAGAGGGATCGATACATGAGCCCTACAGAAGCCCAGGAATTTGGAATTCTGGACAAGGTATTG
GTGCACCCCCCTCAAGATGGCGAGGACGAACCAGAGCTGGTCATAAAGAAGGAGAACCAGACACCCCCAACTGAACCCTA
G
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 14 .75 RPM |
| SRP007412_skeletal_muscle | 15 .41 RPM |
| SRP007412_heart | 15 .76 RPM |
| SRP007412_kidney | 15 .76 RPM |
| SRP007412_liver | 16 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016699 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006284 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007981 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_53 | 56.91 | 70.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000005576 retrocopies