Parental gene: | SLC35C2, ENSCJAG00000017091 |
| Aliases: | None |
| Description: | solute carrier family 35 (GDP-fucose transporter), member C2 [Source:HGNC Symbol;Acc:17117] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:40424575..40433703(-) |
>ENSCJAG00000017091
ATGGGAAGGCTCAGCACCAGCCACCAGCCCCTTAGAGGGGTGCCTGCCCCCGCTGACTCAGGAGCTCGGGTGCTGCAGCC
GCCACGAATGGGGAGGTGGGCTCTCGATGTGGCCTTTGTGTGGAAGGCGGTGTTGACCCTGGGGCTGGTGCTTCTCTACT
ATTGCTTCTCCATCGGTATCACCTTCTACAACAAATGGCTGACAAAGAGCTTCCATTTCCCCCTCTTCATGACGATGCTG
CACCTGGCCGTGATCTTCCTCTTTTCCGCCCTGTCCAGGGCGCTGGTTCAGTGTTCCAGCCACAGGGCCCGCGTGGTGCT
GAGCTGGGCGGACTACCTCAGAAGAGTGGCTCCCACAGCTCTAGCGACGGCACTTGATGTGGGCTTGTCCAACTGGAGCT
TCCTCTATGTCACTGTCTCGCTGTACACAATGACCAAATCCTCAGCTGTCCTCTTCATCTTGATCTTCTCTCTGATCTTC
AAGCTGGAGGAGCTGCGCGCTGCACTGGTCCTGGTGGTCCTCCTCATCGCCGGGGGTCTCTTCATGTTCACCTACAAGTC
CACACAGTTCAACGTGGAGGGCTTTGCTTTGGTGCTGGGGGCCTCATTCATCGGTGGCATTCGCTGGACCCTCACCCAGA
TGCTGCTGCAGAAGGCTGAACTCGGCCTCCAGAATCCCATTGACACCATGTTCCACCTGCAGCCACTCATGTTCCTGGGG
CTCTTCCCTCTCTTTGCTGTATTTGAAGGTCTCCATTTGTCCACATCTGAGAAAATCTTCCGTTTCCAGGACACAGGACT
GCTCCTGCGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTGGTCT
CCAGAACCTCCAGCCTCACTCTCTCCATTGCTGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCTGCTG
GGCGATCAGATCAGCCTCCTGAACTGGCTGGGTTTTGCCCTCTGCCTCTCGGGAATATCCCTCCATGTTGCCCTCAAAGC
TCTGCATTCCAGAGGTGATGGTGGCCCCAAGCCCTTGAAGGGGATGGGCTCCAGCCCCGACCTGGAGCTGCTGCTCCGGA
GCAGCCAGCAAGAGGAAGGTGACAATGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGA
ATGGGAAGGCTCAGCACCAGCCACCAGCCCCTTAGAGGGGTGCCTGCCCCCGCTGACTCAGGAGCTCGGGTGCTGCAGCC
GCCACGAATGGGGAGGTGGGCTCTCGATGTGGCCTTTGTGTGGAAGGCGGTGTTGACCCTGGGGCTGGTGCTTCTCTACT
ATTGCTTCTCCATCGGTATCACCTTCTACAACAAATGGCTGACAAAGAGCTTCCATTTCCCCCTCTTCATGACGATGCTG
CACCTGGCCGTGATCTTCCTCTTTTCCGCCCTGTCCAGGGCGCTGGTTCAGTGTTCCAGCCACAGGGCCCGCGTGGTGCT
GAGCTGGGCGGACTACCTCAGAAGAGTGGCTCCCACAGCTCTAGCGACGGCACTTGATGTGGGCTTGTCCAACTGGAGCT
TCCTCTATGTCACTGTCTCGCTGTACACAATGACCAAATCCTCAGCTGTCCTCTTCATCTTGATCTTCTCTCTGATCTTC
AAGCTGGAGGAGCTGCGCGCTGCACTGGTCCTGGTGGTCCTCCTCATCGCCGGGGGTCTCTTCATGTTCACCTACAAGTC
CACACAGTTCAACGTGGAGGGCTTTGCTTTGGTGCTGGGGGCCTCATTCATCGGTGGCATTCGCTGGACCCTCACCCAGA
TGCTGCTGCAGAAGGCTGAACTCGGCCTCCAGAATCCCATTGACACCATGTTCCACCTGCAGCCACTCATGTTCCTGGGG
CTCTTCCCTCTCTTTGCTGTATTTGAAGGTCTCCATTTGTCCACATCTGAGAAAATCTTCCGTTTCCAGGACACAGGACT
GCTCCTGCGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTGGTCT
CCAGAACCTCCAGCCTCACTCTCTCCATTGCTGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCTGCTG
GGCGATCAGATCAGCCTCCTGAACTGGCTGGGTTTTGCCCTCTGCCTCTCGGGAATATCCCTCCATGTTGCCCTCAAAGC
TCTGCATTCCAGAGGTGATGGTGGCCCCAAGCCCTTGAAGGGGATGGGCTCCAGCCCCGACCTGGAGCTGCTGCTCCGGA
GCAGCCAGCAAGAGGAAGGTGACAATGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .23 RPM |
| SRP051959_skeletal_muscle | 5 .94 RPM |
| SRP051959_lymph_node | 12 .17 RPM |
| SRP051959_lung | 10 .77 RPM |
| SRP051959_liver | 5 .65 RPM |
| SRP051959_kidney | 12 .31 RPM |
| SRP051959_heart | 7 .44 RPM |
| SRP051959_colon | 10 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011583 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000080189 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014052 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006880 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011091 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013582 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005486 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4140 | 76.73 | 50.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017091 retrocopies