Parental gene:

SLC35C2, ENSG00000080189

Aliases:SLC35C2, BA394O2.1, C20orf5, CGI-15, OVCOV1
Description:solute carrier family 35 (GDP-fucose transporter), member C2 [Source:HGNC Symbol;Acc:17117]
Organism:Human (Homo sapiens)
Coordinates:20:44978166..44993043(-)


>ENSG00000080189
ATGGGGAGGTGGGCCCTCGATGTGGCCTTTTTGTGGAAGGCGGTGTTGACCCTGGGGCTGGTGCTTCTCTACTACTGCTT
CTCCATCGGCATCACCTTCTACAACAAGTGGCTGACAAAGAGCTTCCATTTCCCCCTCTTCATGACGATGCTGCACCTGG
CCGTGATCTTCCTCTTCTCCGCCCTGTCCAGGGCGCTGGTTCAGTGCTCCAGCCACAGGGCCCGTGTGGTGCTGAGCTGG
GCCGACTACCTCAGAAGAGTGGCTCCCACAGCTCTGGCGACGGCGCTTGACGTGGGCTTGTCCAACTGGAGCTTCCTGTA
TGTCACCGTCTCGCTGTACACAATGACCAAATCCTCAGCTGTCCTCTTCATCTTGATCTTCTCTCTGATCTTCAAGCTGG
AGGAGCTGCGCGCGGCACTGGTCCTGGTGGTCCTCCTCATCGCCGGGGGTCTCTTCATGTTCACCTACAAGTCCACACAG
TTCAACGTGGAGGGCTTCGCCTTGGTGCTGGGGGCCTCGTTCATCGGTGGCATTCGCTGGACCCTCACCCAGATGCTCCT
GCAGAAGGCTGAACTCGGCCTCCAGAATCCCATCGACACCATGTTCCACCTGCAGCCACTCATGTTCCTGGGGCTCTTCC
CTCTCTTTGCTGTATTTGAAGGTCTCCATTTGTCCACATCTGAGAAAATCTTCCGTTTCCAGGACACAGGGCTGCTCCTG
CGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTGGTCTCCAGAAC
CTCCAGCCTCACTCTCTCCATTGCCGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCTGCTGGGCGATC
AGATCAGCCTCCTGAACTGGCTGGGCTTCGCCCTCTGCCTCTCGGGAATATCCCTCCACGTTGCCCTCAAAGCCCTGCAT
TCCAGAGGTGATGGTGGCCCCAAGGCCTTGAAGGGGCTGGGCTCCAGCCCCGACCTGGAGCTGCTGCTCCGGAGCAGCCA
GCGGGAGGAAGGTGACAATGAGGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 18 .37 RPM
bodymap2_adrenal 31 .91 RPM
bodymap2_brain 10 .69 RPM
bodymap2_breast 15 .56 RPM
bodymap2_colon 9 .49 RPM
bodymap2_heart 7 .33 RPM
bodymap2_kidney 17 .85 RPM
bodymap2_liver 15 .44 RPM
bodymap2_lung 16 .12 RPM
bodymap2_lymph_node 18 .93 RPM
bodymap2_ovary 22 .28 RPM
bodymap2_prostate 21 .34 RPM
bodymap2_skeletal_muscle 9 .53 RPM
bodymap2_testis 21 .36 RPM
bodymap2_thyroid 34 .42 RPM
bodymap2_white_blood_cells 31 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011583 ortholog_one2one 2 retrogenes
retro_chof_2686, retro_chof_952,
Callithrix jacchus ENSCJAG00000017091 ortholog_one2one 1 retrogene
retro_cjac_4140,
Gorilla gorilla ENSGGOG00000014052 ortholog_one2one 1 retrogene
retro_ggor_2982,
Nomascus leucogenys ENSNLEG00000006880 ortholog_one2one 1 retrogene
retro_nleu_1104,
Pongo abelii ENSPPYG00000011091 ortholog_one2one 1 retrogene
retro_pabe_3726,
Pan troglodytes ENSPTRG00000013582 ortholog_one2one 1 retrogene
retro_ptro_3186,
Tupaia belangeri ENSTBEG00000005486 ortholog_one2one 1 retrogene
retro_tbel_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4789 77.72 54.52
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Download FASTA sequences of all ENSG00000080189 retrocopies