Parental gene: | TMEM165, ENSCJAG00000018339 |
| Aliases: | None |
| Description: | transmembrane protein 165 [Source:HGNC Symbol;Acc:30760] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:138142344..138175191(-) |
>ENSCJAG00000018339
AGGCGGCCGCGCCCCGGTGGGAACAGCCGCGCATCGGCGCCCAGGCTGCTGCTTCTCTTGCTGGTTCCGCTGCTGTGGGC
CCTGGCTGGGGTCCGGGCCGGCCCGGATGAAGACCTTAGCCACCGGAACAAAGAACCGCCGGCGCCTGCCCAGCAGCTAC
AGCAGCAGCCGGTGGGATCCCCGGGTACCGAGCCACATAAGCAAGAGAAAGCATTTACACCAGCAGCTCCAGTTCATACT
AATAAGGAAGATCCTGCTGCCCAAACTAATTTGGGATTTATACATGCATTTGTTGCTGCCATATCAGTTATCATTGTATC
TGAATTGGGTGACAAGACATTTTTTATAGCAGCCATCATGGCAATGCGCTATAACCGCCTAACCGTTCTGGCTGGTGCGA
TGCTTGCCTTGGGACTAATGACGTGCTTGTCAGTTTTGTTTGGCTATGCCACCACAGTCATCCCCAGGGTCTATACATAC
TATGTTTCAACTGTGTTATTTGCCATTTTTGGCATTAGAATGCTGCGGGAAGGCTTAAAGATGAGCCCTGACGAAGGTCA
AGAGGAACTGGAAGAAGTTCAGGCTGAATTAAAGAAAAAAGATGAAGAATTTCAACGAACCAAACTTTTAAATGGACCAG
GAGATGTCGAAACAGGAACAAGCACAATAGTACCTCAGAAAAAGTGGTTGCATTTTATTTCACCCATTTTTGTTCAAGCT
CTTACATTAACATTCTTAGCAGAATGGGGTGATCGCTCTCAATTAACTACGATTGTATTGGCAGCAAGAGAGGACCCCTA
TGGTGTAGCCGTGGGTGGAACTGTGGGGCACTCCCTGTGCACGGGACTGGCAGTAATTGGAGGAAGAATGATAGCACAGA
AAATCTCTGTCAGAACTGTGACAATCATAGGAGGCATCGTGTTTTTGGCGTTTGCATTTTCTGCATTATTTATAAGCCCT
GATTCTGGTTTTTAA
AGGCGGCCGCGCCCCGGTGGGAACAGCCGCGCATCGGCGCCCAGGCTGCTGCTTCTCTTGCTGGTTCCGCTGCTGTGGGC
CCTGGCTGGGGTCCGGGCCGGCCCGGATGAAGACCTTAGCCACCGGAACAAAGAACCGCCGGCGCCTGCCCAGCAGCTAC
AGCAGCAGCCGGTGGGATCCCCGGGTACCGAGCCACATAAGCAAGAGAAAGCATTTACACCAGCAGCTCCAGTTCATACT
AATAAGGAAGATCCTGCTGCCCAAACTAATTTGGGATTTATACATGCATTTGTTGCTGCCATATCAGTTATCATTGTATC
TGAATTGGGTGACAAGACATTTTTTATAGCAGCCATCATGGCAATGCGCTATAACCGCCTAACCGTTCTGGCTGGTGCGA
TGCTTGCCTTGGGACTAATGACGTGCTTGTCAGTTTTGTTTGGCTATGCCACCACAGTCATCCCCAGGGTCTATACATAC
TATGTTTCAACTGTGTTATTTGCCATTTTTGGCATTAGAATGCTGCGGGAAGGCTTAAAGATGAGCCCTGACGAAGGTCA
AGAGGAACTGGAAGAAGTTCAGGCTGAATTAAAGAAAAAAGATGAAGAATTTCAACGAACCAAACTTTTAAATGGACCAG
GAGATGTCGAAACAGGAACAAGCACAATAGTACCTCAGAAAAAGTGGTTGCATTTTATTTCACCCATTTTTGTTCAAGCT
CTTACATTAACATTCTTAGCAGAATGGGGTGATCGCTCTCAATTAACTACGATTGTATTGGCAGCAAGAGAGGACCCCTA
TGGTGTAGCCGTGGGTGGAACTGTGGGGCACTCCCTGTGCACGGGACTGGCAGTAATTGGAGGAAGAATGATAGCACAGA
AAATCTCTGTCAGAACTGTGACAATCATAGGAGGCATCGTGTTTTTGGCGTTTGCATTTTCTGCATTATTTATAAGCCCT
GATTCTGGTTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .50 RPM |
| SRP051959_skeletal_muscle | 5 .74 RPM |
| SRP051959_lymph_node | 19 .52 RPM |
| SRP051959_lung | 21 .12 RPM |
| SRP051959_liver | 8 .06 RPM |
| SRP051959_kidney | 16 .99 RPM |
| SRP051959_heart | 11 .65 RPM |
| SRP051959_colon | 22 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ictidomys tridecemlineatus | ENSSTOG00000025897 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_574 | 91.98 | 99.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018339 retrocopies