Parental gene: | ENSCJAG00000018851 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:107191077..107196148(+) |
>ENSCJAG00000018851
ATGGCGTCGGCGGCGGTGGCGCTAAGGATCCGGACAGCCGTTACATCCTTGCTGAGCCCCTCTCCAGCTACAGCTCTTGC
TGTCAGATATGCTTCCAAGAAGACGGGTGGTAGCTCCAAAAACCTTGGTGGAAAGTCATCAGGCAGACGCCTAGGCATTA
AGAAAATGGAAGGACACTATGTTCATGCTGGGAACATCCTTGGAACACAGCGCCATTTCCGCTGGCACCCAGGTGCCCAT
GTGGGTCTTGGGAAGAATAAATGTCTATATGCCCTGGAAGAGGGGATAGTCCACTACACTAAGGATGTCTACGTGCCTCA
TCCCAGAAATATGGAGGCTGTGGATCTCATCACCAGGCTGCCCAAGGGTGCTGTGCTCTACAAGACTTTTGTCCACGTGG
TTCCTACCAAACCTGAGGGCACCTTCAAACTGGTAGCTATGCTTTGA
ATGGCGTCGGCGGCGGTGGCGCTAAGGATCCGGACAGCCGTTACATCCTTGCTGAGCCCCTCTCCAGCTACAGCTCTTGC
TGTCAGATATGCTTCCAAGAAGACGGGTGGTAGCTCCAAAAACCTTGGTGGAAAGTCATCAGGCAGACGCCTAGGCATTA
AGAAAATGGAAGGACACTATGTTCATGCTGGGAACATCCTTGGAACACAGCGCCATTTCCGCTGGCACCCAGGTGCCCAT
GTGGGTCTTGGGAAGAATAAATGTCTATATGCCCTGGAAGAGGGGATAGTCCACTACACTAAGGATGTCTACGTGCCTCA
TCCCAGAAATATGGAGGCTGTGGATCTCATCACCAGGCTGCCCAAGGGTGCTGTGCTCTACAAGACTTTTGTCCACGTGG
TTCCTACCAAACCTGAGGGCACCTTCAAACTGGTAGCTATGCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .91 RPM |
| SRP051959_skeletal_muscle | 6 .79 RPM |
| SRP051959_lymph_node | 3 .47 RPM |
| SRP051959_lung | 3 .14 RPM |
| SRP051959_liver | 6 .00 RPM |
| SRP051959_kidney | 5 .32 RPM |
| SRP051959_heart | 4 .67 RPM |
| SRP051959_colon | 4 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017031 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005103 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000023845 | ortholog_one2many | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000010549 | ortholog_many2many | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000014252 | ortholog_many2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000009698 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017231 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024414 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004601 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005385 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_28 | 99.32 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_378 | 90.48 | 99.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018851 retrocopies