Parental gene: | PPPDE2, ENSCJAG00000018941 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | ACFV01180430.1:8627..13834(-) |
>ENSCJAG00000018941
CCTAGATTGTATTACTATAGTCTTACTGTACATGAGACAGAGAAGTTAGAAAGACATAGCCTGGCAGAGATTATAGTGAG
AGGGAAACAACTGGAAGGCATCTGGCACACCTCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGTGGTATCT
CCAGCTGCCCTCCGGGAGGGACATTGCATGGGCCCCCAGACTCCGTGGTTGATGTGGGGAGTACAGAAGTCACAGAAGAA
ATCTTTCTGGAGTACCCGTCCTCCCTGGGGGAGTCCCTGTTCCGAGCTGAGGCCTACAACCTCTTCAAACACAACGGTAA
CACCTTCAGCAACGAAGTGGCACAGTTCCTGTCTGGGCGGAAGATTCCTTCTTACATCACAGACCTGCCCTCTGAAGTTC
TCTCCACGTAA
CCTAGATTGTATTACTATAGTCTTACTGTACATGAGACAGAGAAGTTAGAAAGACATAGCCTGGCAGAGATTATAGTGAG
AGGGAAACAACTGGAAGGCATCTGGCACACCTCCATAGTTGTGCACAAGGATGAGTTCTTCTTCGGCAGTGGTGGTATCT
CCAGCTGCCCTCCGGGAGGGACATTGCATGGGCCCCCAGACTCCGTGGTTGATGTGGGGAGTACAGAAGTCACAGAAGAA
ATCTTTCTGGAGTACCCGTCCTCCCTGGGGGAGTCCCTGTTCCGAGCTGAGGCCTACAACCTCTTCAAACACAACGGTAA
CACCTTCAGCAACGAAGTGGCACAGTTCCTGTCTGGGCGGAAGATTCCTTCTTACATCACAGACCTGCCCTCTGAAGTTC
TCTCCACGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .65 RPM |
| SRP051959_skeletal_muscle | 0 .50 RPM |
| SRP051959_lymph_node | 0 .68 RPM |
| SRP051959_lung | 0 .86 RPM |
| SRP051959_liver | 1 .58 RPM |
| SRP051959_kidney | 0 .93 RPM |
| SRP051959_heart | 0 .56 RPM |
| SRP051959_colon | 0 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000005136 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016577 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000009480 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1874 | 86.81 | 66.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018941 retrocopies