Parental gene:

ENSCJAG00000020022

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:19140118..19149890(+)


>ENSCJAG00000020022
CTTATTTTTGTATTTTTAGTAGAGACGGGATTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCTTTACCTCAGGTGATCT
GCCTGCCTCGGCCTCCCAAAGTGCTGTGATTACAGGTGTGAGCCACTGTGCTTGGCCTTCTGAGTCAAACATTATTCTTT
TGTTTTGTTTTGTTTTGTTTTTTTTGAGATGGAGTTTCACTCTTGTTACCCAGGCTGGAGTGCAATGGTGTGATCTCGGC
TCACTGCAACCTCCGCCTCCTGGGTTCAGGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGTGCC
ACCATGCCCAGCTTTTTGTATTTTTATAGAGATGGAGTTTTACCATGTTTTGCAGGTTGGTCTTGAACTCCTGACCTCAG
GTGACCCGCCTGCCTTGAACTCCCAAAGTGCTGGGATTATAGGCGTGAGCCAC

Library Parental gene expression (RPM)
SRP051959_spleen 0 .99 RPM
SRP051959_skeletal_muscle 0 .44 RPM
SRP051959_lymph_node 1 .10 RPM
SRP051959_lung 0 .67 RPM
SRP051959_liver 0 .71 RPM
SRP051959_kidney 1 .18 RPM
SRP051959_heart 1 .19 RPM
SRP051959_colon 0 .93 RPM



No homologs available

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3346 66.23 100.00
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2. retro_cjac_3351 64.23 86.75
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3. retro_cjac_3366 62.09 100.00
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4. retro_cjac_3378 57.52 100.00
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5. retro_cjac_3408 57.52 99.34
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6. retro_cjac_3432 61.07 96.69
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7. retro_cjac_3434 58.17 99.34
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8. retro_cjac_3453 65.93 88.08
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9. retro_cjac_3467 60.40 94.04
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10. retro_cjac_3585 66.88 100.00
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11. retro_cjac_3604 50.75 88.08
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12. retro_cjac_3610 58.96 86.75
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13. retro_cjac_3671 51.39 90.07
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14. retro_cjac_3680 55.93 77.48
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15. retro_cjac_3757 59.57 90.07
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16. retro_cjac_3770 61.97 91.39
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17. retro_cjac_3775 65.36 100.00
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Download FASTA sequences of all ENSCJAG00000020022 retrocopies