Parental gene: | ENSCJAG00000020030 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:79437935..79457300(-) |
>ENSCJAG00000020030
ATGGATACCCTGTACCAGCAAACGCACAAGCAGGTCCATGAGATCCAGTCTCGCATGGGACGCCTGGAGACGGCAGACAA
GCAGTCTGTGCACTTAGTAGAAAACGAAATCCAAGCAAGCATAGACCAGATATTCAGCCATCTAGAACGCCTGGAGATTT
TATCCAGCAAGGAGCCCCCTAACAAAAGGCAGAATGCCAAACTTCGGGTTGACCAGTTAAAGTATGATGTCCAGCACCTG
CAGACTGCTCTCAGAAACTTCCAGCATCGGCGCCATGCAAGGGAACAGCAGGAGAGGCAGCGAGAAGAGCTTCTGTCTCG
AACCTTCACCACTAACGACTCTGACACCACCATACCAATGGACGAATCACTGCAGTTTAACTCCTCCCTCCAGAAAATTC
ACCACGGCGTGGATGACCTCATTTTAGATGGGCACAATATTTTAGATGGACTGAGGAACCAGAGACTGACCTTGAAGGGC
ACTCAGAAGAAGATCCTCGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCATCGAGAAGCGGGCTTT
CCAGGACAAGTACTTCATGATCGAGACGGGGTTTTGCTGTCTTGGCCAGATTGGTCTTGAACTCTTGGCCCCAAGAGATC
CGCCCCCTTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAACCAC
ATGGATACCCTGTACCAGCAAACGCACAAGCAGGTCCATGAGATCCAGTCTCGCATGGGACGCCTGGAGACGGCAGACAA
GCAGTCTGTGCACTTAGTAGAAAACGAAATCCAAGCAAGCATAGACCAGATATTCAGCCATCTAGAACGCCTGGAGATTT
TATCCAGCAAGGAGCCCCCTAACAAAAGGCAGAATGCCAAACTTCGGGTTGACCAGTTAAAGTATGATGTCCAGCACCTG
CAGACTGCTCTCAGAAACTTCCAGCATCGGCGCCATGCAAGGGAACAGCAGGAGAGGCAGCGAGAAGAGCTTCTGTCTCG
AACCTTCACCACTAACGACTCTGACACCACCATACCAATGGACGAATCACTGCAGTTTAACTCCTCCCTCCAGAAAATTC
ACCACGGCGTGGATGACCTCATTTTAGATGGGCACAATATTTTAGATGGACTGAGGAACCAGAGACTGACCTTGAAGGGC
ACTCAGAAGAAGATCCTCGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCATCGAGAAGCGGGCTTT
CCAGGACAAGTACTTCATGATCGAGACGGGGTTTTGCTGTCTTGGCCAGATTGGTCTTGAACTCTTGGCCCCAAGAGATC
CGCCCCCTTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAACCAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .70 RPM |
| SRP051959_skeletal_muscle | 6 .05 RPM |
| SRP051959_lymph_node | 10 .14 RPM |
| SRP051959_lung | 9 .16 RPM |
| SRP051959_liver | 9 .47 RPM |
| SRP051959_kidney | 9 .98 RPM |
| SRP051959_heart | 8 .26 RPM |
| SRP051959_colon | 7 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013419 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000028951 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002709 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018689 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004922 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009323 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016069 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3180 | 79.50 | 91.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020030 retrocopies