Parental gene: | TOR1A, ENSCJAG00000020346 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:173807258..173818125(-) |
>ENSCJAG00000020346
ATGGCCTTCGCGGCAGGAGGAACCGGAAGCGCGAGTCTGGCGGCGGTACTAGTGCGCGGTCGGCGCCAGAACGCGCAGGG
CGGCGCGGGTCCGGGCATGAAGCTGAGCCGGGCTGCGCTGGGCCTGCTGCTGCTGGCGCCGTCCGTGGTGCAGGCGGTAG
AGCCCATCAGCCTGGGACTGGCCCTGGCCGGCGTCCTCACCGGCTACATCTACCCGCGTCTCTACTGCCTCTTCGCCGAG
TGCTGCGGCCAGAAGCGGAGCCTCAGCCGGGAGGCGCTGCAGAAGGATCTGGACAACAAGCTCTTTGGACAGCATCTTGC
AAAGAAAATCATCTTAAATGCTGTGTTTGGTTTCATAAACAACCCAAAGCCCAAGAAACCTCTCACCCTCTCCCTGCATG
GGTGGACGGGCACCGGCAAAAATTTCGTCAGCAAGATCATCGCGGAGAATATTTACGAGGGTGGTCTCAACAGTGACTAT
GTCCACCTGTTTGTGGCCACACTGCACTTTCCACATGCCTCAAACATCACCTTGTACAAGGACCAGTTACAGTTGTGGAT
TCGAGGCAACGTGAGCGCCTGTGCGAGGTCCATCTTCATATTCGATGAAATGGATAAGATGCATGCAGGTCTCATAGATG
CCATCAAGCCTTTCCTTGACTACTACGACCTGGTGGATGGGGTCTCCTACCAGAAAGCCATCTTTATATTTCTCAGCAAT
GCTGGAGCAGAAAGGATCACAGATGTGGCTTTAGATTTCTGGAGGAGTGGAAAGCAGAGGGAAGACATCAAGCTCAAAGA
CATTGAACACGCCTTATCTGTGTCGGTTTTCAATAACAAAAACAGTGGCTTCTGGCACAGCAGCTTAATTGACCGGAACC
TCATTGATTATTTTGTTCCCTTCCTCCCCCTGGAATACAAACACCTAAAAATGTGTATCAGAGTCGAAATGCAGTCCCGA
GGCTATGACATTGATGAAGACATTGTAAGCAGAGTGGCTGAGGAGATGACATTTTTCCCCAAAGAGGAGAGAGTTTTCTC
AGATAAAGGCTGCAAAACCGTGTTTACCAAGTTAGATTATTACTACGATGATTGA
ATGGCCTTCGCGGCAGGAGGAACCGGAAGCGCGAGTCTGGCGGCGGTACTAGTGCGCGGTCGGCGCCAGAACGCGCAGGG
CGGCGCGGGTCCGGGCATGAAGCTGAGCCGGGCTGCGCTGGGCCTGCTGCTGCTGGCGCCGTCCGTGGTGCAGGCGGTAG
AGCCCATCAGCCTGGGACTGGCCCTGGCCGGCGTCCTCACCGGCTACATCTACCCGCGTCTCTACTGCCTCTTCGCCGAG
TGCTGCGGCCAGAAGCGGAGCCTCAGCCGGGAGGCGCTGCAGAAGGATCTGGACAACAAGCTCTTTGGACAGCATCTTGC
AAAGAAAATCATCTTAAATGCTGTGTTTGGTTTCATAAACAACCCAAAGCCCAAGAAACCTCTCACCCTCTCCCTGCATG
GGTGGACGGGCACCGGCAAAAATTTCGTCAGCAAGATCATCGCGGAGAATATTTACGAGGGTGGTCTCAACAGTGACTAT
GTCCACCTGTTTGTGGCCACACTGCACTTTCCACATGCCTCAAACATCACCTTGTACAAGGACCAGTTACAGTTGTGGAT
TCGAGGCAACGTGAGCGCCTGTGCGAGGTCCATCTTCATATTCGATGAAATGGATAAGATGCATGCAGGTCTCATAGATG
CCATCAAGCCTTTCCTTGACTACTACGACCTGGTGGATGGGGTCTCCTACCAGAAAGCCATCTTTATATTTCTCAGCAAT
GCTGGAGCAGAAAGGATCACAGATGTGGCTTTAGATTTCTGGAGGAGTGGAAAGCAGAGGGAAGACATCAAGCTCAAAGA
CATTGAACACGCCTTATCTGTGTCGGTTTTCAATAACAAAAACAGTGGCTTCTGGCACAGCAGCTTAATTGACCGGAACC
TCATTGATTATTTTGTTCCCTTCCTCCCCCTGGAATACAAACACCTAAAAATGTGTATCAGAGTCGAAATGCAGTCCCGA
GGCTATGACATTGATGAAGACATTGTAAGCAGAGTGGCTGAGGAGATGACATTTTTCCCCAAAGAGGAGAGAGTTTTCTC
AGATAAAGGCTGCAAAACCGTGTTTACCAAGTTAGATTATTACTACGATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .92 RPM |
| SRP051959_skeletal_muscle | 4 .78 RPM |
| SRP051959_lymph_node | 8 .52 RPM |
| SRP051959_lung | 6 .88 RPM |
| SRP051959_liver | 6 .78 RPM |
| SRP051959_kidney | 6 .12 RPM |
| SRP051959_heart | 4 .84 RPM |
| SRP051959_colon | 5 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020343 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2243 | 91.78 | 60.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2758 | 99.70 | 90.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020346 retrocopies