Parental gene: | TOR1B, ENSCJAG00000020343 |
| Aliases: | None |
| Description: | torsin family 1, member B (torsin B) [Source:HGNC Symbol;Acc:11995] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:173796895..173803430(+) |
>ENSCJAG00000020343
ATGTTGCAGGCCGGGTGGCTCCGGGGCGACGCGGTGTTGGCGCTGCTGCTGGCGACCCGAGTGGTGGCGGCGTTTGAGCC
CATCACCGTGGGTATCGCCATCGGGGCCGCGTCGGCCATCACCGGCTACCTGACCTACAATGACATCTACTGCCGCTTCG
CCGAGTGCTGCCGCGAGGAGCGGCCGCTCAACGCCTCGGCCCTCAAGCTGGATTTGGAGGAGAAGCTGTTTGGACAGCAT
CTGGCCACAGAAGTGATTCTCAAGGCGCTGACTGGCTTCAAGAACAACAAAAATCCCAAGAAACCACTGACCCTTTCCTT
ACACGGCTGGGCTGGCACAGGCAAGAATTTTGTCAGCCAAATTGTGGCTGAAAATCTCCACCCAAAAGGTCTGAAGAGTA
ACTTTGTCCACCTGTTTGTATCGACTCTGCACTTCCCTCATGAGCAGAAGATAAAACTGTACCAGGACCAGTTACAGAAG
TGGATTCGCGGTAACGTGAGTGCATGTGCGAACTCTGTTTTCATATTTGACGAGATGGATAAATTACACCCTGGGATCAT
TGACGCAATCAAGCCGTTTCTAGACTACTACGAGCAGGTTGACGGCGTTTCTTACCGCAAAGCCATCTTCATCTTCCTCA
GCAAACTCAGCAATGCAGGCGGGGACCTTATAACTAAGACGGCTCTGGACTTTTGGCGGGCTGGAAGGAAGCGGGAAGAC
ATTCACCTGAAGGACCTGGAACCTGTGCTGTCTGTCGGAGTCTTCAATAATAAACACAGTGGCCTGTGGCACAGTGGACT
GATCGACAAAAACCTCATTGATTACTTTATCCCCTTCCTGCCCTTGGAGTACAGACATGTGAAAATGTGTGTGAGGGCGG
AGATGAGGGCCCGTGGTTCTGCCGTAGATGAAGACATCGTCTCGAGTGTGGCAGATGAAATGACGCTTTTCCCCAAAGAC
GAGAAGATCTACTCAGACAAGGGCTGCAAGACTGTGCAGTCACGGCTTGACTTCCACTGA
ATGTTGCAGGCCGGGTGGCTCCGGGGCGACGCGGTGTTGGCGCTGCTGCTGGCGACCCGAGTGGTGGCGGCGTTTGAGCC
CATCACCGTGGGTATCGCCATCGGGGCCGCGTCGGCCATCACCGGCTACCTGACCTACAATGACATCTACTGCCGCTTCG
CCGAGTGCTGCCGCGAGGAGCGGCCGCTCAACGCCTCGGCCCTCAAGCTGGATTTGGAGGAGAAGCTGTTTGGACAGCAT
CTGGCCACAGAAGTGATTCTCAAGGCGCTGACTGGCTTCAAGAACAACAAAAATCCCAAGAAACCACTGACCCTTTCCTT
ACACGGCTGGGCTGGCACAGGCAAGAATTTTGTCAGCCAAATTGTGGCTGAAAATCTCCACCCAAAAGGTCTGAAGAGTA
ACTTTGTCCACCTGTTTGTATCGACTCTGCACTTCCCTCATGAGCAGAAGATAAAACTGTACCAGGACCAGTTACAGAAG
TGGATTCGCGGTAACGTGAGTGCATGTGCGAACTCTGTTTTCATATTTGACGAGATGGATAAATTACACCCTGGGATCAT
TGACGCAATCAAGCCGTTTCTAGACTACTACGAGCAGGTTGACGGCGTTTCTTACCGCAAAGCCATCTTCATCTTCCTCA
GCAAACTCAGCAATGCAGGCGGGGACCTTATAACTAAGACGGCTCTGGACTTTTGGCGGGCTGGAAGGAAGCGGGAAGAC
ATTCACCTGAAGGACCTGGAACCTGTGCTGTCTGTCGGAGTCTTCAATAATAAACACAGTGGCCTGTGGCACAGTGGACT
GATCGACAAAAACCTCATTGATTACTTTATCCCCTTCCTGCCCTTGGAGTACAGACATGTGAAAATGTGTGTGAGGGCGG
AGATGAGGGCCCGTGGTTCTGCCGTAGATGAAGACATCGTCTCGAGTGTGGCAGATGAAATGACGCTTTTCCCCAAAGAC
GAGAAGATCTACTCAGACAAGGGCTGCAAGACTGTGCAGTCACGGCTTGACTTCCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .24 RPM |
| SRP051959_skeletal_muscle | 4 .08 RPM |
| SRP051959_lymph_node | 6 .16 RPM |
| SRP051959_lung | 6 .34 RPM |
| SRP051959_liver | 9 .88 RPM |
| SRP051959_kidney | 7 .06 RPM |
| SRP051959_heart | 5 .21 RPM |
| SRP051959_colon | 5 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020346 | within_species_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009763 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004915 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1349 | 76.09 | 67.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020343 retrocopies