Parental gene:

WBP11, ENSCJAG00000021611

Aliases:None
Description:WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461]
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:6691353..6707771(+)


>ENSCJAG00000021611
ATGGGACGGAGATCTACGTCATCCACCAAGAGTGGAAAATTTATGAACCCCACAGACCAAGCCGGAAAGGAAGCCCGGAA
GAGAGAATTAAAGAAGAACAAAAAACAGCGCATGATGGTTCGAGCTGCCGTTTTAAAGATGAAGGATCCAAAACAGATTA
TCCGAGACATGGAGAAATTGGATGAAATGGAGTTTAACCCAGTGCAACAGCCACAATTAAATGAGAAAGTACTGAAAGAT
AAGCGTAAAAAGCTGCGTGAAACCTTTGAACGTATTCTGCGACTCTATGAAAAAGAGAATCCAGATATTTACAAAGAATT
GAGAAAGCTAGAAGTAGAGTATGAGCAGAAGAGGGCTCAACTTAGCCAATATTTTGATGCTGTCAAGAATGCTCAGCATG
TGGAAGTGGAGAGTATTCCTTTGCCAGATATGCCACATGCTCCTTCCAACATTTTGATCCAGGACATTCCACTTCCTGGT
GCCCAGCCACCCTCCATCCTAAAGAAAACCTCAGCCTATGGACCCCCAACTCGGGCAGTTTCCATCCTTCCTCTTCTTGG
ACATGGTGTTCCACGTTTACCCCCTGGCAGAAAACCTCCTGGCCCTCCTCCTGGTCCACCTCCTCCTCAAGTCGTGCAGA
TGTATGGCCGTAAAGTTGGTTTTGCCCTCGATCTTCCCCCTCGTAGGCGAGATGAAGACATGTTATATAGTCCTGAACTT
GCCCAGCGAGGTCATGATGATGATATTTCTAGCACCAGTGAAGATGATGGCTATCCTGAGGACATGGATCAAGATAAGCA
TGATGACAGTACTGATGACAGTGACACTGACAAATCAGATGGAGAAAGTGAGGGGGATGAATTTGTGCACCGTGATGACG
GGGAGAGAGACAACAATGAAGAAAAGAAGTCAGGTCTGAGTGTACGGTTTGCAGATATGCCTGGAAAATCAAGGAAGAAA
AAGAAAAATATGAAGGAACTGACTCCTCTTCAAGCCATGATGCTTCGTATGGCAGGTCAAGAAATCCCTGAGGAGGGACG
GGAGGTAGAGGAATTTTCAGAAGATGATGATGAAGATGATTCTGATGACTCTGAAGCAGAAAAGCAATCACAGAAACAAC
ATAAAGAGGAATCCCATTCCGATGGCACATCCACTGCTTCTTCACAGCAGCAGGCTCCCCCGCAGTCTGTTCCTCCTTCT
CAGATACAAGCACCTCCCATGCCAGGACCACCACCTCTTGGACCACCACCTGCTCCACCATTACGGCCTCCTGGGCCACC
TACGGGCCTTCCTCCTGGTCCACCTCCTGGAGCTCCTCCATTCCTTAGACCACCTGGAATGCCAGGACTCCGAGGGCCTT
TACCCCGACTTTTACCTCCAGGACCACCACCAGGCCGACCCCCTGGCCCTCCCCCAGGTCCACCTCCAGGTCTGCCTCCT
GGTCCTCCTCCTCGGGGACCTCCACCAAGGCTACCTCCCCCTGCACCTCCAGGTATTCCTCCACCTCGTCCTGGCATGAT
GCGCCCACCTTTGGTGCCTCCCCTTGGACCTGCTCCCCCTGGGCTTTTCCCACCAGCTCCCTTGCCGAACCCTGGGGTTT
TAAGTGCCCCACCCAACTTGATTCAGCGACCCAAGGCGGATGATACGAGTGCAGCCACCATTGAGAAGAAAGCCACAGCA
ACCATCAGTGCCAAGCCACAGATCACTAATCCCAAGGCAGAGATTACTCGATTTGTGCCCACTGCACTGAGAGTACGTCG
GGAGAATAAAGGAGCTACTGCTGCTCCCCAAAGAAAGTCAGAGGATGATTCTGCTGCGCCTCTTGCCAAGGCAGCACCCA
AATCTGGTCCTTCTGTTCCTGTCTCAGTACAAACTAAGGATGATGTCTATGAGGCTTTCATGAAGGAGATGGAAGGGCTA
CTGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 22 .44 RPM
SRP051959_skeletal_muscle 24 .35 RPM
SRP051959_lymph_node 26 .03 RPM
SRP051959_lung 24 .86 RPM
SRP051959_liver 15 .44 RPM
SRP051959_kidney 20 .90 RPM
SRP051959_heart 20 .54 RPM
SRP051959_colon 15 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014759 ortholog_many2many 1 retrogene
retro_btau_20,
Canis familiaris ENSCAFG00000012926 ortholog_one2many 2 retrogenes
retro_cfam_1369, retro_cfam_1911,
Homo sapiens ENSG00000084463 ortholog_one2one 2 retrogenes
retro_hsap_1878, retro_hsap_4719,
Gorilla gorilla ENSGGOG00000004448 ortholog_one2one 3 retrogenes
retro_ggor_1375, retro_ggor_1711, retro_ggor_2932,
Macropus eugenii ENSMEUG00000013971 ortholog_one2many 1 retrogene
retro_meug_1952,
Myotis lucifugus ENSMLUG00000015216 ortholog_many2many 1 retrogene
retro_mluc_1074,
Macaca mulatta ENSMMUG00000019299 ortholog_one2one 1 retrogene
retro_mmul_1329,
Monodelphis domestica ENSMODG00000017949 ortholog_many2many 1 retrogene
retro_mdom_143,
Mustela putorius furo ENSMPUG00000011619 ortholog_one2many 1 retrogene
retro_mputfur_280,
Mus musculus ENSMUSG00000030216 ortholog_one2many 1 retrogene
retro_mmus_2740,
Nomascus leucogenys ENSNLEG00000003926 ortholog_one2one 1 retrogene
retro_nleu_2651,
Oryctolagus cuniculus ENSOCUG00000017177 ortholog_one2many 1 retrogene
retro_ocun_974,
Otolemur garnettii ENSOGAG00000010518 ortholog_many2many 1 retrogene
retro_ogar_207,
Ochotona princeps ENSOPRG00000015008 ortholog_one2many 3 retrogenes
retro_opri_107, retro_opri_1159, retro_opri_678,
Pongo abelii ENSPPYG00000004323 ortholog_one2one 3 retrogenes
retro_pabe_1558, retro_pabe_2099, retro_pabe_3663,
Pan troglodytes ENSPTRG00000004724 ortholog_one2one 3 retrogenes
retro_ptro_1260, retro_ptro_1637, retro_ptro_3136,
Rattus norvegicus ENSRNOG00000005505 ortholog_many2many 3 retrogenes
retro_rnor_1287, retro_rnor_2726, retro_rnor_741,
Rattus norvegicus ENSRNOG00000049593 ortholog_many2many 1 retrogene
retro_rnor_740,
Sorex araneus ENSSARG00000007085 ortholog_one2many 1 retrogene
retro_sara_753,
Sarcophilus harrisii ENSSHAG00000016649 ortholog_many2many 1 retrogene
retro_shar_81,
Tupaia belangeri ENSTBEG00000003394 ortholog_one2many 1 retrogene
retro_tbel_2213,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1737 68.37 85.96
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Download FASTA sequences of all ENSCJAG00000021611 retrocopies