Parental gene: | WBP11, ENSOPRG00000015008 |
| Aliases: | None |
| Description: | WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_353:100590..111853(-) |
>ENSOPRG00000015008
ATGGGACGAAGATCTACATCATCCACCAAGAGTGGAAAATTTATGAACCCCACAGACCAAGCCCGAAAGGAAGCCCGGAA
GAGAGAATTAAAAAAGAACAAGAAACAGCGCATGATGGTGCGAGCTGCGGTTCTGAAGATGAAGGATCCCAAGCAGATTA
TCCGGGACATGGAAAAATTGGATGAAATGGAGTTTAACCCAGTACAACAGCCACAGTTAAACGAGAAAGTACTGAAAGAC
AAGCGTAAAAAGCTGCGTGAAACCTTTGAACGTATTCTCCGACTTTATGAAAAAGAGAATCCAGATATTTATAAAGAATT
GAGAAAACTAGAAGTAGAATATGAACAAAAACGGGCTCAACTTAGCCAGTATTTTGATGCTGTTAAGAATGCTCAGCATG
TCGAAGTGGAGAGTATTCCCCTGCCAGATATGCCACATGCTCCTTCCAACATCTTGATCCAGGACATTCCACTTCCTGGT
GCCCAGCCACCCTCCATCCTAAAGAAAACTTCAGCCTATGGACCTACAACCCGGGCAGTTTCTATATTTCCTCTTCTTGG
ACACAGTGTTCCACGTTTGCCCCCTGGCAGAAAACCTCCTGGCCCTCCCCCGGGCCCACCGCCGCCTCAGGTCTTACAGA
TGTATGGCCGCAAAGTGGGCTTTGCCCTGGATCTTCCTCCTCGCAGGCGAGATGAAGACATGCTATATAGTCCTGAACTC
GCCCAGCGGGGTCATGACGACGATGTCTCCAGCACGAGTGAGGATGACGGCTATCCTGAGGACATGGACCAGGAGAAGCA
CGATGACAGCTCTGATGACAGTGACACTGACAGATCAGATGGAGAGAGTGAGGGGGATGAATTTGCGCATCGTGATGACA
ATGACCGAGACAACAATGAAGAAAAAAAATCAGGTCTGAGTGTACGGTTTGCTGATATGCCTGGAAAATCGAGGAAGAAA
AAGAAGAACATGAAGGAGCCGACCCCTGTTCAAGCCATGATGCTTCGGATGGCAGGTCAGGAAATCCCTGAGGAGGGTAG
AGAAGTAGAGGAATTTTCCGAGGACGACGATGATGATGATTCTGAAGATTCTGCAGCAGAGAAGCAGTCACAAAAGCAGC
ATAAAGAAGATTCCCACTCTGATGGCACGTCTGCATCTTCGCAGCAGCAGGCTCCTCCCCAGTCTGTTCCTCCCTCTCAG
ATACAAGCACCCCCCATGCCAGGACCCCCTCCTCTTGGACCACCACCTGCTCCACCTTTAGGGCCTGGACCACCTACNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCCCTCCACCTCGTCCTGGCATGATGCGGCC
ACCTCTGGTGCCTCCACTCGGACCTGCCCCACCTGGGCTTTTCCCACCAGCTCCCTTGCCCAACCCAGGGGTTTTGAGTG
CCCCACCCAATTTGATTCAACGACCCAAGGCGGATGATACAAGTGCAGCCACCATTGAGAAGAAAGCCACAGCAACCATC
AGTGCCAAGCCACAAATCACTAATCCCAAGGCAGAGATTACTCGATTTGTTCCCACCGCACTGAGAGTACGTCGGGAGAA
TAAAGGGGCTTCTGTTCCCCAAAGAAAGTCAGAGGAGGATTCTGCTGTGCCTCTTGCCAAAGCAGCCCCCAAGTCTGGCC
CTGCTGTTCCTGTTTCTGTACAAACTAAAGATGATGTTTATGAGGCTTTCATGAAAGAGATGAAAGGGTTGCTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014759 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012926 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021611 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000084463 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004448 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013971 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015216 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019299 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017949 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011619 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000030216 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003926 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017177 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010518 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004323 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004724 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005505 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049593 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000007085 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016649 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003394 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_107 | 66.47 | 50.78 | Please wait, loading  |
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| 2. | retro_opri_678 | 73.31 | 50.47 | Please wait, loading |
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| 3. | retro_opri_1159 | 66.47 | 50.78 | Please wait, loading |
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Download FASTA sequences of all ENSOPRG00000015008 retrocopies