Parental gene:

CFDP1, ENSCPOG00000000695

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_22:1869252..1999459(+)


>ENSCPOG00000000695
ATGGAAGAATTCGATTCCGAAGACTTCTCCACCTCGGAGGAGGATGAAGACTACGTGCCGTCGGGTGGAGAGTATAGTGA
AGATGATGTAAATGAATTAGTAAAGGAAGATGAAGTGGATGGCGAAGAGCAGACACAGAAAACCAAAGGGAAAAAAAGAA
AGACTCAGAGCATTCCGGCCAGGAAGAGAAAACAAAGCTGCCTGTTGTTAGAGGACGAAGAGGAGGATGCCAAGACAAAA
TCCGGAGGAAGCAGCAGCGAGGAGGATGGGGTAGGAGAGGTGGAGAAAGGCACTGGGCCTGAGGACGCAAGGCGGAAGAA
GGAGGATGAGCTCTGGGCTAGCTTCCTCAATGACGTGGGACCAAAGTCCAAAGTGCCCCCGAGCACACAGGCGAAGACAG
AAGAACAGACTGAAGAGACAACTTCAAGTAAATCGTTGATCAAAACAGAAGAGCTAGAGAAACCTAAAGAAGCAGAAAAA
GTTAAAATCACTAAGGTGTTTGATTTTGCTGGTGAAGAAGTAAGGGTGACTAAGGAGGTGGATGCTACATCTAAAGAAGC
CAAGTCCTTCTTCAAGCAAAATGAGAAAGAAAAACCGCAGTCCAGTGCCCCTTTGGCTGCGCCGTCACTCTCTGCTGGGC
CGGGGTTAAAAAGGTCAAGTGGCATGAGCAGCCTTTTGGGGAAAATTGGAGCCAAGAAGCAGAAAATGAGCACCCTTGAG
AAATCCAAATTGGACTGGGAGAGCTTCAAGGAGGAAGAAGGAATTGGTGAAGAACTGGCTATCCATAATCGAGGAAAAGA
AGGGTACATTGAACGGAAGGCTTTTCTAGAGCGTGTGGACCACAGGCAGTTTGAAATTGAACGAGATCTCAGGCTGAGCA
AAATGAAGCCT

Library Parental gene expression (RPM)
SRP017611_brain 27 .03 RPM
SRP017611_kidney 40 .93 RPM
SRP017611_liver 33 .69 RPM
SRP040447_lung 30 .97 RPM
SRP040447_skeletal_muscle 7 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013266 ortholog_one2one 2 retrogenes
retro_dnov_2442, retro_dnov_2546,
Echinops telfairi ENSETEG00000016429 ortholog_one2one 1 retrogene
retro_etel_1574,
Myotis lucifugus ENSMLUG00000000890 ortholog_one2many 1 retrogene
retro_mluc_2525,
Rattus norvegicus ENSRNOG00000019326 ortholog_one2one 1 retrogene
retro_rnor_2289,
Ictidomys tridecemlineatus ENSSTOG00000004124 ortholog_one2many 2 retrogenes
retro_itri_1117, retro_itri_1815,
Tupaia belangeri ENSTBEG00000015362 ortholog_one2one 2 retrogenes
retro_tbel_1305, retro_tbel_2189,
Tursiops truncatus ENSTTRG00000001215 ortholog_one2one 1 retrogene
retro_ttru_1385,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_465 60.62 52.53
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Download FASTA sequences of all ENSCPOG00000000695 retrocopies