Parental gene:

METTL5, ENSCPOG00000003343

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:19656375..19666506(+)


>ENSCPOG00000003343
AAGTTAAAGCTTAAAGAACTAGAGAGTCGTCTGCAACAAGTGGATGGATTCGAAAAACCCAAGCTACGTCTAGAACAGTA
TCCGACCCGGCCGCACATTGCAGCTTGTATGCTGTATACAATCCATAACACATATGATGACATTGAAAATAAAGTGGTTG
CAGATCTAGGATGTGGTTGTGGAATGCTTAGCATTGGAACTGCAATGTTAGGAGCAGGACTGTGTGTTGGATTCGACATA
GATGAAGATGCACTCGAAATATTTAACAGGAATGTGGAAGAGTTTGAATTAACGAATGTTGATATGGTTCAGTGTGATGT
ATGCTCATTATCTAACAGAATGGCCAAGTCATTTGATACAGTGATTATGAATCCTCCCTTTGGAACCAAAAATAATAAAG
GGATAGATATGACTTTTCTTAAGACTGCTTTGGAAATGGCAAGAACAGCAGTGTATTCTTTACATAAATCCTCCACTAGA
GAACATGTTCAGAAAAAAGCTGCAGAATGGAAAATCAAGATAGATATTATCGCAGAGCTTCGATATGACCTGCCAGCATT
ATATAACTTTCATAAAAAGAAATCAGTGGACATTGAAGTGGATCTAATTCGGTTTTCTTTT

Library Parental gene expression (RPM)
SRP017611_brain 9 .55 RPM
SRP017611_kidney 9 .53 RPM
SRP017611_liver 10 .23 RPM
SRP040447_lung 10 .24 RPM
SRP040447_skeletal_muscle 14 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013460 ortholog_one2one 2 retrogenes
retro_dnov_1043, retro_dnov_773,
Homo sapiens ENSG00000138382 ortholog_one2one 2 retrogenes
retro_hsap_1365, retro_hsap_2930,
Gorilla gorilla ENSGGOG00000022484 ortholog_one2one 2 retrogenes
retro_ggor_1064, retro_ggor_2032,
Loxodonta africana ENSLAFG00000018044 ortholog_one2one 2 retrogenes
retro_lafr_1213, retro_lafr_864,
Macaca mulatta ENSMMUG00000023054 ortholog_one2one 3 retrogenes
retro_mmul_1430, retro_mmul_1953, retro_mmul_2193,
Nomascus leucogenys ENSNLEG00000005018 ortholog_one2one 4 retrogenes
retro_nleu_1070, retro_nleu_1919, retro_nleu_753, retro_nleu_990,
Oryctolagus cuniculus ENSOCUG00000010405 ortholog_one2one 1 retrogene
retro_ocun_1440,
Pongo abelii ENSPPYG00000012916 ortholog_one2one 2 retrogenes
retro_pabe_2281, retro_pabe_2523,
Pan troglodytes ENSPTRG00000012621 ortholog_one2one 3 retrogenes
retro_ptro_1822, retro_ptro_2062, retro_ptro_938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_373 51.22 58.94
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Download FASTA sequences of all ENSCPOG00000003343 retrocopies