Parental gene:

METTL5, ENSDNOG00000013460

Aliases:None
Description:methyltransferase like 5 [Source:HGNC Symbol;Acc:25006]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_16122:12701..23821(-)


>ENSDNOG00000013460
ATGAAGAAATTAAAGTTTAAGGAACTGGAGAGTCGCCTGCAACAAGTGGATGGATTCGTAAAACCCAAACTGCTTCTAGA
ACAGTATCCCACCAGGCCGCACATTGCAGCTTGTATGCTCTATACAATCCATAACACATACGATGACATTGAAAATAAAG
TGGTTGCAGATTTAGGATGTGGTTGTGGAGTGCTTAGCATCGGAACTGCAATGTTAGGAGCAGGATTGTGTGTTGGATTT
GACATAGATGAAGATGCATTGGAAATATTTAATAGGAATGTTGAAGAATTTGAGTTAACAAATATTGACATGGTTTTAAG
TGATGTGTGCTCACTATCTAAAATGTCCAAATCATTTGATACAGTAATTATGAATCCTCCCTTTGGAACAAAAAATAACA
AAGGGATAGATATTGCTTTTCTGAAGACTGCTCTGGAAATGGCAAGAACAGCAGTATATTCTTTACACAAATCCTCAACT
AGAGAACATATTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATCATTGCAGAACTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGACATTGAAGTGGACCTAATTCGGTTTTCTTTTTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 17 .11 RPM
SRP012922_cerebellum 21 .31 RPM
SRP012922_heart 16 .71 RPM
SRP012922_kidney 24 .09 RPM
SRP012922_liver 8 .98 RPM
SRP012922_lung 23 .21 RPM
SRP012922_quadricep_muscle 12 .12 RPM
SRP012922_spleen 25 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012438 ortholog_one2one 1 retrogene
retro_cfam_1726,
Callithrix jacchus ENSCJAG00000006777 ortholog_one2one 2 retrogenes
retro_cjac_2282, retro_cjac_729,
Cavia porcellus ENSCPOG00000003343 ortholog_one2one 1 retrogene
retro_cpor_373,
Homo sapiens ENSG00000138382 ortholog_one2one 2 retrogenes
retro_hsap_1365, retro_hsap_2930,
Gorilla gorilla ENSGGOG00000022484 ortholog_one2many 2 retrogenes
retro_ggor_1064, retro_ggor_2032,
Loxodonta africana ENSLAFG00000018044 ortholog_one2one 2 retrogenes
retro_lafr_1213, retro_lafr_864,
Macaca mulatta ENSMMUG00000023054 ortholog_one2one 3 retrogenes
retro_mmul_1430, retro_mmul_1953, retro_mmul_2193,
Nomascus leucogenys ENSNLEG00000005018 ortholog_one2one 4 retrogenes
retro_nleu_1070, retro_nleu_1919, retro_nleu_753, retro_nleu_990,
Oryctolagus cuniculus ENSOCUG00000010405 ortholog_one2one 1 retrogene
retro_ocun_1440,
Pongo abelii ENSPPYG00000012916 ortholog_one2one 2 retrogenes
retro_pabe_2281, retro_pabe_2523,
Pan troglodytes ENSPTRG00000012621 ortholog_one2one 3 retrogenes
retro_ptro_1822, retro_ptro_2062, retro_ptro_938,
Tursiops truncatus ENSTTRG00000002154 ortholog_one2one 2 retrogenes
retro_ttru_251, retro_ttru_38,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_773 72.18 63.46
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2. retro_dnov_1043 70.62 84.62
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Download FASTA sequences of all ENSDNOG00000013460 retrocopies