Parental gene:

NUDT21, ENSCPOG00000003705

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_22:25472010..25486194(+)


>ENSCPOG00000003705
ATGTCTGTGGTACCGCCCAATCGTTCGCAGACGGGCTGGCCGCGGGGAGTCAACCAGTTCGGCAACAAGTACATCCAGCA
GACCAAGCCCCTCACCTTGGAGCGCACCATCAACCTGTACCCCCTTACCAACTACACTTTTGGTACAAAAGAGCCTCTCT
ATGAAAAGGACAGCTCGGTTGCAGCCAGATTTCAACGCATGAGGGAGGAATTTGATAAAATTGGAATGAGGAGAACTGTA
GAAGGGGTTCTGATTGTACATGAGCACCGGCTTCCCCATGTGTTACTACTACAGCTGGGAACAACTTTCTTCAAATTACC
TGGTGGTGAACTTAATCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATTCTGGGTCGCCAGGATG
GAGTCCTACAAGACTGGGTCATTGATGACTGCATTGGTAACTGGTGGAGGCCAAATTTTGAGCCTCCTCAGTATCCATAT
ATTCCTGCACATATTACAAAGCCGAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
TCCTAAAAATTACAAACTGGTAGCTGCACCATTGTTTGAATTGTATGACAATGCACCAGGATATGGACCCATCATTTCCA
GTCTTCCTCAGCTGTTGAGCAGGTTCAATTTTATATACAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 19 .56 RPM
SRP017611_kidney 21 .88 RPM
SRP017611_liver 15 .41 RPM
SRP040447_lung 18 .89 RPM
SRP040447_skeletal_muscle 11 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012724 possible_ortholog 3 retrogenes
retro_cjac_1121, retro_cjac_2211, retro_cjac_4100,
Felis catus ENSFCAG00000008669 ortholog_one2one 1 retrogene
retro_fcat_1843,
Loxodonta africana ENSLAFG00000028465 ortholog_one2one 1 retrogene
retro_lafr_610,
Mustela putorius furo ENSMPUG00000003451 possible_ortholog 1 retrogene
retro_mputfur_158,
Mus musculus ENSMUSG00000031754 ortholog_one2one 3 retrogenes
retro_mmus_1949, retro_mmus_1950, retro_mmus_2142,
Oryctolagus cuniculus ENSOCUG00000017224 possible_ortholog 2 retrogenes
retro_ocun_154, retro_ocun_87,
Otolemur garnettii ENSOGAG00000014888 ortholog_one2one 2 retrogenes
retro_ogar_1450, retro_ogar_630,
Ochotona princeps ENSOPRG00000006689 ortholog_one2one 1 retrogene
retro_opri_637,
Sarcophilus harrisii ENSSHAG00000009651 ortholog_one2one 1 retrogene
retro_shar_469,
Sus scrofa ENSSSCG00000029848 possible_ortholog 2 retrogenes
retro_sscr_117, retro_sscr_185,
Tursiops truncatus ENSTTRG00000013545 ortholog_one2one 1 retrogene
retro_ttru_1087,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1054 77.54 60.79
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Download FASTA sequences of all ENSCPOG00000003705 retrocopies