Parental gene:

ENSCPOG00000005452

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_29:8280117..8372800(-)


>ENSCPOG00000005452
ATGGCGGCGGTGTCAATGTCAGTGGCGCTGAGACAAGCGTTGTTGGGGAGAAGGGCAGTGGCTACAGCTGCCTTTTCCAC
TTCCAGGATCCTGACCAGGTTGTTGAGCACATCCACATGGAGGCTGGCACAGGACCAAATTCAAGACACGCAACTTATAA
CAGTTGATGAAAAATTGGATATCACTACATTAACTGGAGTTCCAGAAGAGCATATCAAAACTAGAAAAGTTAGGATCTTT
GTTCCTGCTCGCAATAACATGCAGTCTGGAGTGAACAACACAAAGAAATGGAAAATGGAGTTTGATACCAGGGAGCGATG
GGAAAATCCTTTGATGGGTTGGGCATCAACGGCTGATCCCTTGTCCAACATGGTTCTAACCTTCAGTACCAAAGAAGATG
CAGTTGCCTTTGCAGAAAAAAATGGATGGAGCTATGATGTTGAAGAAAGGAAAGTTCCAAAACCTAAGTCCAAATCTTAT
GGTGCAAACTTTTCCTGGAACAAAAGAACAAGAGTATCCACAAAA

Library Parental gene expression (RPM)
SRP017611_brain 15 .76 RPM
SRP017611_kidney 35 .59 RPM
SRP017611_liver 25 .59 RPM
SRP040447_lung 15 .69 RPM
SRP040447_skeletal_muscle 58 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000015851 ortholog_one2many 3 retrogenes
retro_eeur_133, retro_eeur_30, retro_eeur_347,
Macropus eugenii ENSMEUG00000001362 ortholog_one2many 1 retrogene
retro_meug_651,
Microcebus murinus ENSMICG00000015138 possible_ortholog 1 retrogene
retro_mmur_355,
Monodelphis domestica ENSMODG00000019465 ortholog_one2many 1 retrogene
retro_mdom_1227,
Mus musculus ENSMUSG00000021764 ortholog_one2many 1 retrogene
retro_mmus_3372,
Ochotona princeps ENSOPRG00000013784 ortholog_one2many 1 retrogene
retro_opri_508,
Procavia capensis ENSPCAG00000013496 ortholog_one2many 1 retrogene
retro_pcap_268,
Pongo abelii ENSPPYG00000015455 possible_ortholog 1 retrogene
retro_pabe_193,
Sus scrofa ENSSSCG00000016893 ortholog_one2many 1 retrogene
retro_sscr_999,
Tupaia belangeri ENSTBEG00000004605 possible_ortholog 1 retrogene
retro_tbel_2068,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1111 75.49 80.49
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Download FASTA sequences of all ENSCPOG00000005452 retrocopies