Parental gene: | THOC5, ENSCPOG00000010974 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_4:13599700..13634513(+) |
>ENSCPOG00000010974
ATGTCAACAGAATCAAGCAAAAAACGGAAACCCAAAGTGATCCGCAGTGATGGAACTCCAACTGAAGGAAAGCGAAATCG
ATCAGACACTGAGCAGGAAGGTAGATACTACAGTGAAGAGGCTGAGGTGGACCTGCGGGACCCTGGCAGAGACTATGAGT
TGTACAAGTACACATGCCAGGAGCTACAGAGGCTAATGGCTGAGATCCAAGACCTGAAGAGCAGAGGCGGCAAGGATGCG
GCAATTGAAATTGAAGAACGGAGGATCCAGAGCTGTGTGCATTTCATGACTCTAAAGAAACTTAACCGATTAGCTCACAT
CAGGTTGAAGAAAGGAAGAGATCAGACCCATGAGGCCAAGCAAAAAGTAGATGCCTATCATCTGCAGCTCCAGAACTTGC
TGTATGAGGTGATGCATCTGCAGAAGGAGATCACCAAGTGTCTGGAGTTCAAGTCAAAGCATGAAGAAATTGATCTGGTC
AGCTTAGAAGAGTTTTACAAGGAGGCTCCAACAGACATCAGCAAGGCTGAAGTCACCATGGGAGACCCTCATCAACAGAC
CCTGGCACGGCTGGACTGGGAGCTGGAGCAGCGAAAAAGATTGGCAGAGAAGTACCGAGAGTGCCTGTCCAACAAGGAAA
AAATCCTCAAAGAGATTGAGGTGAAGAAGGAGTACCTGAGCAGCCTTCAGCCTCGGCTCAATAGCATCATGCAGGCTTCC
CTCCCAGTGCAGGAGTACCTGTTCATGCCATTTGACCAGGCTCACAAACAGTATGAAACAGCTAGACACCTGCCACCTCC
CCTCTACGTGCTCTTTGTGCAGGCTACCGCCTATGGGCAGGCATGTGATAAGACCTTGTCTGTGGCCATCGAAGGCAGTG
TGGATGAAGCCAAGGCTCTGTTCAAGCCTCCTGATGATTCCCAAGATGATGAGAGTGACTCAGATGCTGAGGAGGAGCAG
ACCACGAAGCGACGGCGACCCACACTAGGAGTTCAGTTGGATGACAAGCGCAAGGAGATGCTGAAGAGACACCCTCTGTC
CGTCATGGTTGACCTGAAATGCAAAGATGATAGCGTGCTTCACCTGACTTTCTACTACCTCATGAACCTCAACATCCTGA
CTGTGAAAGCCAAAGTGACAACTGCCACGGAGCTGATCACCCCCATCAGTGCAGGGGACTTGCTATCTCCTGACTCAGTG
CTAAGCTGTTTGTATCCTGGTGATCATGGAAAGAAAACTCCAAATCCAGCCAATCAATACCAGTTCGATAAAGTTGGTAT
TTTAACTTTGAGAGACTATGTACTTGACCTAGGTCACCCCTATTTGTGGGTACAGAAACTGGGAGGCCTCCACTTCCCCA
AAGAGCAACCCCAGCACACAGTGATTGCTGATCACTCGCTGAGTGCCAGCCACATGGAAACAACTATGAAGCTGCTGAAG
ACCAGGGTGCAGTCCCGGCTGGCCCTCCACAAACAGTTTGCATCCCTGGAACATGGTATTGTGCCAGTTACCAGTGATTG
CCAGTACCTCTTCCCTGCCAAGGTTGTCTCTCGCTTGGTGAAGTGGGTGACAATTGTCCATGAAGATTATATGGAATTGC
ATTACACTAAGGACATTGTGGAAGCAGGACTCGCTGGGGACACCAATCTCTACTACCTGGCGCTCATTGAGAGGGGCACA
GCCAAACTCCAGGCTGCTGTGGTATTGAACCCTGGCTACTCCTCCATCCCACCCATTTTCCAGCTCTGTTTGAACTGGAA
AGGAGAGAAAACCAACAGCAATGATGACAACATTCGGGCCATGGAGAGTGAGGTCAATGTGTGCTACAAGGAGCTCTGTG
GTCCTCGGCCCAGTCATCAGCTTTTGACCAACCAGCTGCAGCGGCTATGTGTGCTCCTCGATGTCTACCTGGAGACTGAG
AGCCATGACGACAGTGTGGAGGGACCCAAGGAATTTCCCCAAGAGAAGATGTGTTTGCGGCTTTTCAGGGGTCCAAGTAG
GATGAAGCCCTTTAAATATAACCATCCTCAGGGATTCTTCAGCCATCGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 35 .43 RPM |
| SRP017611_kidney | 34 .76 RPM |
| SRP017611_liver | 20 .59 RPM |
| SRP040447_lung | 52 .38 RPM |
| SRP040447_skeletal_muscle | 41 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019894 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000004247 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012135 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000542 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1508 | 75.49 | 74.67 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000010974 retrocopies