Parental gene:

ZDHHC20, ENSCPOG00000011489

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_6:24589608..24618510(-)


>ENSCPOG00000011489
GGAAAGACCGTTGTTTACCTTGTGGCTTTTCATCTGTTCTTTGTTATGTTTGTATGGTCCTATTGGATGACAATATTCAC
ATCTCCCGCTACCCCTTGCAAAGAGTTCTACTTGTCTACTTCGGAAAAGGAAGCTTATGAAAAGGAAGACAACCAAGAAA
GACAACAAGCAATTTTGAGAAGGGCAGCAAGAGACTTGCCTATCTATACCACAACAGCTTCAAGAACTATCAGATACTGT
GAAAAGTGTCAGTTGATTAAACCTGATCGGACCCATCACTGCTCAGCATGTGACACATGCGTTCTTAAGATGGATCATCA
CTGTCCTTGGGTGAATAACTGTGTGGGATTTTCTAATTACAAATTCTTCATGCTGTTTTTACTGTATTCTCTGTTATATT
GCCTTTTTGTTGCAACAACAGTTTTAGAGTACTTTATAAAATTTTGGACGCTTTGCCGCAGGAAATCTACAGAGAATTGT
CCAAAGAATGAACTGACAGATACACGTGCAAAATTCCACGTACTTTTCCTTTTCTTTGTGTCTGCAATGTTCTTCATCAG
TGTCCTCTCGCTATTCAGCTACCACTGCTGGCTAGTTGGAAAAAATAGAACAACTATAGAATCATTCCGTGCACCTACGT
TTTCGTATGGACCTGATGGGAATGGTTTCTCTCTTGGGTACACCAAAAATTGGAGACAAGTATTTGGTGAAGAAAAGAAA
TATTGGCTACTTCCAGTGTTTTCAAGCTTGGGTGACGGTTGCAGTTTCCCTACTCGCCTGGTGGGGATGGATCCAGAACA
AGCTTCTGGGACAAACCAAAATGACTATGCTAGAAGTATTGCCTCAAATCCACCTTTTCCTACCAGACCACTTAGTGAGT
CAAAAAACCGTTTGTTGGACACTGACTGTCAGTGGCTGGAAAACGGAGCTGAAGACGGTGCCATCAGATCAGGGACAAAT
AACCATGTTACAGTGGCAGTAGAAAAT

Library Parental gene expression (RPM)
SRP017611_brain 15 .64 RPM
SRP017611_kidney 15 .49 RPM
SRP017611_liver 19 .98 RPM
SRP040447_lung 25 .45 RPM
SRP040447_skeletal_muscle 5 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012155 ortholog_one2one 2 retrogenes
retro_chof_1627, retro_chof_2008,
Equus caballus ENSECAG00000016465 ortholog_one2one 1 retrogene
retro_ecab_683,
Homo sapiens ENSG00000180776 ortholog_one2one 1 retrogene
retro_hsap_1211,
Gorilla gorilla ENSGGOG00000000435 ortholog_one2one 2 retrogenes
retro_ggor_1003, retro_ggor_943,
Macaca mulatta ENSMMUG00000007373 ortholog_one2one 1 retrogene
retro_mmul_1288,
Pongo abelii ENSPPYG00000005201 ortholog_one2one 1 retrogene
retro_pabe_1081,
Pan troglodytes ENSPTRG00000005695 ortholog_one2one 1 retrogene
retro_ptro_829,
Tarsius syrichta ENSTSYG00000003013 ortholog_one2one 1 retrogene
retro_tsyr_998,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_303 62.50 51.96
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Download FASTA sequences of all ENSCPOG00000011489 retrocopies