Parental gene:

ZDHHC20, ENSTSYG00000003013

Aliases:None
Description:zinc finger, DHHC-type containing 20 [Source:HGNC Symbol;Acc:20749]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_7187:7720..37672(-)


>ENSTSYG00000003013
ACTATTTCTGGAAATGAAGAAAATGGAACGTCAGCAGTTTACCTTGTGGCTTTACATCATTTCTTTGTTATGGTATGGTC
CTACCGGAGGACAATTTTCACCTCTCCCGCTTCCCCCTCCAAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCCATCAGATACTGTGAAAAGTGTCAGTTGATCAAACCTGACCGGGCACACCACTGCTCAGCATGTGACACATG
TGTTCTTAAGATGGATCACCACTGTCCGTGGGTGAATAACTGTGTGGGATTTTCCAATTACAAGTTCTTCCTGCTGTTTC
TGCTATACTCCCTGCTGTACTGCCTTTTCGTGGCTGTCACGGTTTTAGAGTANNNNNNNNNNNNNNNNNNNAATGAACTG
ACAGACACACGTGCAAAATTCCACATCCTCTTCCTCTTCTTCGTGTCTGCGATGTTCTTCATCAGCGTCCTCTCACTCTT
CAGTTACCACTGCTGGCTCGTTGGAAAAAACAGAACAACGATAGAATCATTCCGTGCACCAACATTTTCATATGGACCAG
ATGGAAATGGTTTCTCTCTTGGATGCAGTAAAAATTGGAGACAAGTCTTTGGTGATGAGAAGAAATACTGGTTACTTCCA
GTGTTTTCAAGCTTAGGTGATGGCTGCAGCTTTCCAACTCGCCTTGTGGGGATGGATCCAGAGCAAGCTTCTGCTACAAG
CCAAAATGAGTTTGCCAGAAGTATTAGCTCAAATCAGCCTTTTCCTATCAAACCACTTAGTGAATCAAAAAACCGCTTGT
TGGACAGTGACTCTCAGTGGCTAGACAATGGAGCTGAAGAGGGCATCGTCAGATCAGGGACAAATAACCATGTTACAGTG
GCAATAGAAAATTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012155 ortholog_one2one 2 retrogenes
retro_chof_1627, retro_chof_2008,
Cavia porcellus ENSCPOG00000011489 ortholog_one2one 1 retrogene
retro_cpor_303,
Equus caballus ENSECAG00000016465 ortholog_one2one 1 retrogene
retro_ecab_683,
Homo sapiens ENSG00000180776 ortholog_one2one 1 retrogene
retro_hsap_1211,
Gorilla gorilla ENSGGOG00000000435 ortholog_one2one 2 retrogenes
retro_ggor_1003, retro_ggor_943,
Macaca mulatta ENSMMUG00000007373 ortholog_one2one 1 retrogene
retro_mmul_1288,
Pongo abelii ENSPPYG00000005201 ortholog_one2one 1 retrogene
retro_pabe_1081,
Pan troglodytes ENSPTRG00000005695 ortholog_one2one 1 retrogene
retro_ptro_829,
Tarsius syrichta ENSTSYG00000006767 other_paralog 1 retrogene
retro_tsyr_263,
Tarsius syrichta ENSTSYG00000012575 within_species_paralog 1 retrogene
retro_tsyr_1557,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_998 52.54 54.63
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Download FASTA sequences of all ENSTSYG00000003013 retrocopies