Parental gene:

HESX1, ENSCPOG00000012741

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_0:51501561..51503090(+)


>ENSCPOG00000012741
ATGTCTGCCTGCCTGCAGCAAGGCGTCCAGCCTAGGGAGGGCAAACCGCTCCCCTGCTCCTTCTCAATCGAGAGCATCCT
AGGACCGGACCTGGAGAAAGACTGTGTCCCGTCCCTGAGGTTTCACAGGCCCTGGGCGGATACCTGCAGCTCCTCGGGGA
AAGATGGTAACCTATGTCTACCTGTCCCAAGTCTTCCCAATGGGATCTCAGTACCCGGAGTGGTGGATCACCCAGCTACA
GAAGAAAGGATTTCAAAACACGAACATTACCTTTCAACCTCAGAAAGACTGTCTTTGAAAAGAGAGATGGGTTGGTATAG
AGGACGAAGACCAAGAACTGCTTTTACTCAGAACCAGATTGAAGTATTGGAAAATGTCTTTAGAGTGAACTGCTATCCTG
GCATTGATATCCGAGAAGACTTAGCTCAAAAATTGAATCTAGAGGAAGACAGAATTCAGATTTGGTTCCAAAACCGGCGG
GCAAAGCTGAAAAGGTCCCACAGAGAATCACAGTTTTTAATGGCG

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM
SRP040447_lung 0 .05 RPM
SRP040447_skeletal_muscle 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011722 ortholog_one2one 1 retrogene
retro_amel_862,
Canis familiaris ENSCAFG00000007995 ortholog_one2one 2 retrogenes
retro_cfam_1907, retro_cfam_954,
Choloepus hoffmanni ENSCHOG00000013897 ortholog_one2many 1 retrogene
retro_chof_123,
Callithrix jacchus ENSCJAG00000010981 ortholog_one2one 1 retrogene
retro_cjac_891,
Cavia porcellus ENSCPOG00000003420 other_paralog 1 retrogene
retro_cpor_149,
Dasypus novemcinctus ENSDNOG00000003677 ortholog_one2one 1 retrogene
retro_dnov_58,
Mustela putorius furo ENSMPUG00000016854 ortholog_one2many 2 retrogenes
retro_mputfur_112, retro_mputfur_174,
Tupaia belangeri ENSTBEG00000017505 ortholog_one2one 1 retrogene
retro_tbel_339,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1067 95.45 50.29
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Download FASTA sequences of all ENSCPOG00000012741 retrocopies