Parental gene:

HESX1, ENSCJAG00000010981

Aliases:None
Description:HESX homeobox 1 [Source:HGNC Symbol;Acc:4877]
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:33162571..33164891(-)


>ENSCJAG00000010981
ATGTCTCCCAGCCTTCAGGAAGGCGCTCAGCTCCGGGAAAGCAAACCCTCAACTTGCTCCTTTTCAATTGAGAGAATCTT
AGGAATGGACGAGAAGAAAGACTGTGTTCCATTAGTGAAACCCTACTGGCCCTGGGCAGACACCTGCAGCTCCTCAGGGA
AAGATGGTAACTTATGTCTATATGTCCCAAATCCTCCCAATGGCATTTCATTCCCTAGCATGGTGGATCACCCAATACCA
GAAGAAAGAGCTTCAAAATATGAAAATTACTTTTCAGCCTCAGAAAGACTGTATTTGAAAAGAGAGTTGAGTTGGTATAG
AGGCCGAAGACCAAGAACTGCTTTTACTCAAAACCAGATTGAAGTGTTAGAAAATGTCTTTAGAGTAAACTGCTATCCTG
GCATTGATATTAGAGAAGACTTAGCTCGAAAATTGAATCTAGAGGAAGACAGAATCCAGATTTGGTTCCAAAATCGGCGT
GCAAAACTGAAAAGATCCCATAGAGAATCACAGTTTCTAATGGCGAAAAAAAATTTCAACACAAATCTCCTGGAATAG

Library Parental gene expression (RPM)
SRP051959_spleen 0 .19 RPM
SRP051959_skeletal_muscle 0 .09 RPM
SRP051959_lymph_node 0 .18 RPM
SRP051959_lung 0 .16 RPM
SRP051959_liver 0 .09 RPM
SRP051959_kidney 0 .04 RPM
SRP051959_heart 0 .09 RPM
SRP051959_colon 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011722 ortholog_one2one 1 retrogene
retro_amel_862,
Choloepus hoffmanni ENSCHOG00000013897 possible_ortholog 1 retrogene
retro_chof_123,
Callithrix jacchus ENSCJAG00000009866 within_species_paralog 1 retrogene
retro_cjac_326,
Callithrix jacchus ENSCJAG00000018583 other_paralog 1 retrogene
retro_cjac_1380,
Cavia porcellus ENSCPOG00000012741 ortholog_one2one 1 retrogene
retro_cpor_1067,
Dasypus novemcinctus ENSDNOG00000003677 ortholog_one2one 1 retrogene
retro_dnov_58,
Mustela putorius furo ENSMPUG00000016854 ortholog_one2many 2 retrogenes
retro_mputfur_112, retro_mputfur_174,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_891 96.24 100.00
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Download FASTA sequences of all ENSCJAG00000010981 retrocopies