Parental gene:

SKP2, ENSCPOG00000013303

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_29:20080204..20106991(-)


>ENSCPOG00000013303
TTCCACAGGAAGCACCTCCAGGAGATTCCAGACCAGAGTAGCAACGTTACCACCAGCTTCACCTGGGGATGGGATTCCAA
TAAGACTTCTGAACTGTTGTCAGGCATGGGGGTCTCCGCCCTTGAGAAGGAGGAGGTGGACAGTGAGAACATTCCCCAGG
AACTGCTCCCAAACGTGGGCCACCCACAGAGCCCCCCACGGAAAAGGCTGAAAAGTAAAGGAAATGATAAAGATTTTGTG
ATCATCCGCAGGCCTAAGCTCAATCGAGAGAACTTTCCAGGTGTTTCATGGGACTCCCTCCCAGATGAGCTTCTCCTGGG
GATTTTTTCTTGTCTGTGCCTCCCTGAGCTGCTGAGAGTGTCTGGTGTCTGTAAGAGGTGGTACTGCCTTGCGTTTGACG
AGTCTCTTTGGCAGACCCTAGACCTCACAGGTAGAAATCTGCACCCAGATGTGACTGGTCGTTTGCTGTCGCGAGGAGTG
ATTGCCTTCCGCTGCCCACGATCATTTATGGACCAGCCATTGGTTGAACATTTCAGCCCTTTCCGCGTACAGCACATGGA
CCTGTCGAACTCCGTTATAAATGTGAATACCCTCCTTGGCATTCTGTCTCGGTGCACCAAGTTGCAGAATCTAAGCCTGG
AAGGCCTACAGCTTTCAGATCCCATTGTCAATAATCTTGCACAGAACTCAAATTTAGTGCGACTAAACCTTTGTGGGTGT
TCTGGATTTTCAGACTCTGCTCTAAAGACTTTGCTAAGCAGCTGTTCCAGGCTGGATGAGCTGAATCTGTCCTGGTGCTT
TGATTTCACTGAAAAGCATGTGCAAGTGGCTGTAACACATGTGTCAGAAACAGTCACCCAGCTGAATCTCAGTGGCTATA
GAAAGAATCTCCAGAAGTCAGATGTCTCTACCTTAATTAGAAGATGCCCCAACCTTGTCCATCTAGACTTAAGTGATAGT
ATCATGTTGAAGAATGATTGCTTTCCAGAATTTCTCCAGCTCAACTACCTCCAACACTTGTCACTCAGTCGGTGCTATGA
TATAATACCTGAAACACTACTTGAACTTGGAGAAATCCCTACACTGAAAACACTACAAGTTTTTGGAATCGTGCCAGATG
GTACCCTTCAACTATTAAGAGAAGCCCTTCCTCATCTGCAGATTAATTGTTCCTATTTCACTACCATTGCCAGGCCAACT
GTTGGCAACATAAAGAACCAGGAGATATGGGGCATCAAATGCCGCCTGTCACTGCAAAAGCCCAATTGTCTATGA

Library Parental gene expression (RPM)
SRP017611_liver 2 .92 RPM
SRP017611_kidney 2 .20 RPM
SRP017611_brain 2 .59 RPM
SRP040447_lung 3 .61 RPM
SRP040447_skeletal_muscle 2 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013562 ortholog_one2many 4 retrogenes
retro_btau_1108, retro_btau_1612, retro_btau_525, retro_btau_555,
Callithrix jacchus ENSCJAG00000018275 possible_ortholog 1 retrogene
retro_cjac_2367,
Nomascus leucogenys ENSNLEG00000016025 ortholog_one2one 1 retrogene
retro_nleu_2553,
Oryctolagus cuniculus ENSOCUG00000009154 ortholog_one2many 1 retrogene
retro_ocun_158,
Pelodiscus sinensis ENSPSIG00000008375 ortholog_one2one 1 retrogene
retro_psin_28,
Rattus norvegicus ENSRNOG00000016823 ortholog_one2one 1 retrogene
retro_rnor_621,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1166 99.61 59.91
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Download FASTA sequences of all ENSCPOG00000013303 retrocopies