Parental gene:

Skp2, ENSRNOG00000016823

Aliases:Skp2, RGD1562456
Description:S-phase kinase-associated protein 2 [Source:RefSeq peptide;Acc:NP_001099886]
Organism:Rat (Rattus norvegicus)
Coordinates:2:77593580..77621639(-)


>ENSRNOG00000016823
ATGCATAGGAAGCACCTTCAGGAGATTCCGGACCAGAGTAGCAACGTCACCACCAGCTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGTGTCTCTGCCTTGGAGAAGGAGGAGGTGGACAGTGAGAACATCCCACATG
GACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCCAAGGAAAAGGCTAAAGAGCAAAGGGAGTGACAAAGACTTTGTG
ATCATTCGTCGGCCTAAGCTCAATCGAGAGAACTTTCCAGGTGTTTCCTGGGACTCCCTTCCAGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTGTGCCTCCCTGAGCTTTTGAGAGTCTCTGGAGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATG
AGTCTCTCTGGCAGTCCCTAGACCTCGCAGGCAAAAATCTGCACCCAGACGTGACAGTGCGCCTGCTCTCTCGAGGAGTC
GTGGCCTTCCGCTGCCCACGGTCGTTTATGGAGCAGCCACTGGGCGAAAGCTTCAGCTCTTTCCGTGTACAGCACATGGA
CCTGTCGAACTCAGTTATAAATGTGTCAAACCTCCACGGGATTCTGTCCGAGTGCTCCAAGCTGCAGAATCTGAGTCTGG
AAGGCCTGCAGCTTTCAGATCCCATTGTCACTACTCTTGCGCAGAATGAAAACTTGGTGCGACTGAACCTTTGTGGGTGC
TCTGGATTTTCTGAGTCTGCCGTGGCCACCCTGCTGAGCAGCTGCTCCAGACTGGATGAACTGAACCTCTCCTGGTGCTT
TGACTTCACTGAGAAGCATGTGCAAGCGGCCGTGGCACATTTACCAGATACGCTCACCCAGCTGAACCTCAGCGGCTACC
GAAAGAACCTCCAGAAAACAGATCTTTGTACCCTAATTAAACGATGCCCCAACCTCGTCCGCCTCGACTTAAGTGACAGT
ATCATGCTGAAGAATGACTGCTTTCCAGAATTTTTTCAACTCAACTACCTCCAACACCTCTCGCTCAGCCGGTGCTACGA
TATAATACCTGAGACGCTACTTGAACTCGGAGAAATCCCCACACTAAAAACACTACAAGTTTTTGGGATCGTGCCAGACG
GGACCCTTCAGCTACTGAGAGAAGCTCTTCCTCGCCTGCAGATTAATTGTGCCTATTTCACCTCCATTGCAAGGCCAACT
ATGGACAACAAGAAGAACCCGGAGATTTGGGGTATCAAATGCCGACTGACCCTGCAAAAGCCCAGTTTATGA

Library Parental gene expression (RPM)
SRP017611_brain 5 .61 RPM
SRP017611_kidney 3 .21 RPM
SRP017611_liver 1 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013562 ortholog_one2many 4 retrogenes
retro_btau_1108, retro_btau_1612, retro_btau_525, retro_btau_555,
Callithrix jacchus ENSCJAG00000018275 possible_ortholog 1 retrogene
retro_cjac_2367,
Cavia porcellus ENSCPOG00000013303 ortholog_one2one 1 retrogene
retro_cpor_1166,
Nomascus leucogenys ENSNLEG00000016025 ortholog_one2one 1 retrogene
retro_nleu_2553,
Oryctolagus cuniculus ENSOCUG00000009154 ortholog_one2many 1 retrogene
retro_ocun_158,
Pelodiscus sinensis ENSPSIG00000008375 ortholog_one2one 1 retrogene
retro_psin_28,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_621 93.21 90.31
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Download FASTA sequences of all ENSRNOG00000016823 retrocopies