Parental gene:

HOMER2, ENSCPOG00000014688

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_10:32676637..32708622(+)


>ENSCPOG00000014688
TGCAGAGAGCAGCCCATCTTCACCACCCGAGCGCACGTCTTCCAGATCGACCCCAACACCAAGAAGAACTGGGTGCCTGC
CAGCAAGCAGGCCGTCACCGTTTCCTATTTCTACGATGTCACAAGGAACAGCTACCGGATCATCAGTGTGGATGGAGCCA
AGGTGATCATAAACAGCACAATCACACCGAATATGACCTTCACCAAAACGTCACAGAAGTTTGGGCAGTGGGCCGACAGC
AGAGCCAACACAGTGTTTGGTCTGGGGTTTTCCTCTGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTTCAGGAGGTAAA
AGAAGCTGCCAAACTCGCCAGAGAAAAGTCCCAGGAAAAAATCGAGACCTCAAGTAATCATTCCCAGGCGTCCAGTGTGA
ACGGGACAGACGATGAAAAGGCCTCTCACGCGGGTCCAGCCGACACGCACCTCAAGTCTGAGAACGACAAGCTGAAGATT
GCGCTGACGCAGAGTGCTGCCAACGTGAAGAAATGGGAGATCGAGCTGCAGACCCTGCGGGAGAGCAATGCGCGGCTGAC
CACGGCGCTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAAGCAGTTCTTCATCTGCCGGGATGAGAACGACCAGC
TCCGCCACAAGATTGACGAACTAGAAGAACAGTGTAATGAGATCAACAGGGAAAAGGAGAAGAATTCGCAGCTGAAGAGA
AGAATTGAAGAACTAGAGTCAGAACTCCGAGAGAAGGAGACGGAGTTGAAAGATCTCCGAAAACAAAGTGAAATCATACC
CCAACTCATGTCAGAGTGTGAATATGTCTCTGAGAAGTTAGAGGCAGCAGAGAGAGACAATCAGAACCTGGAAGACAAAG
TGCGGTCTCTAAAGACAGACATTGAGGAGAGTAAGTACCGGCAGCGCCACCTGAAGGTGGAGCTGAAGAGCTTCCTGGAG
GTGCTGGACGGGAAGATCGATGACCTCCATGACTTCCGCCGAGGCCTCTCCAAGCTGGGCACGGACAACTAG

Library Parental gene expression (RPM)
SRP017611_brain 6 .44 RPM
SRP017611_kidney 0 .10 RPM
SRP017611_liver 9 .27 RPM
SRP040447_lung 7 .54 RPM
SRP040447_skeletal_muscle 97 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015884 ortholog_many2many 3 retrogenes
retro_cjac_3556, retro_cjac_3614, retro_cjac_3871,
Equus caballus ENSECAG00000023619 ortholog_one2many 3 retrogenes
retro_ecab_1046, retro_ecab_661, retro_ecab_692,
Homo sapiens ENSG00000103942 ortholog_one2many 1 retrogene
retro_hsap_1468,
Macaca mulatta ENSMMUG00000008297 ortholog_many2many 1 retrogene
retro_mmul_2278,
Nomascus leucogenys ENSNLEG00000010953 ortholog_one2many 1 retrogene
retro_nleu_3002,
Pongo abelii ENSPPYG00000006735 ortholog_one2many 5 retrogenes
retro_pabe_1209, retro_pabe_1210, retro_pabe_1217, retro_pabe_3566, retro_pabe_3568,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_35 66.18 99.13
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Download FASTA sequences of all ENSCPOG00000014688 retrocopies