Parental gene: | CMPK1, ENSCPOG00000014747 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_189:904481..943477(-) |
>ENSCPOG00000014747
CCGCTGCTGACCTGTCAGACGCTTCTCTGTGTTTCTCGCCTCATGAAGCCGCTGGTCGTGTTCGTCCTCGGCGGTCCTGG
TGCCGGCAAGGGGACCCAATGCGCCCGAATCGTGGAGAAATATGGCTACACACATCTTTCTGCAGGAGAACTTCTTCGTG
ATGAAAGGAAGAACCCAGAGTCACAGTATGGTGAACTCATTGACAAGTACATTAAAGAAGGAAAGATTGTGCCAGTTGAG
ATAACTATCAGTTTATTAAAGAGGGAAATGGATCAAACAATGGCTGCCAATGCCCAGAAGAATAAATTCTTGATTGATGG
GTTTCCAAGAAATCAAGACAACCTTCAAGGCTGGAACAAGACCATGGATGGGAAAGCAGACGTATCTTTTGTTCTATTTT
TTGATTGTAATAATGAGATCTGTATTGAACGATGTCTTGAAAGGGGAAAAAGTAGTGGTAGAAGTGATGACAACAGAGAG
AGCTTGGAAAAGAGGATTCAGACTTATCTTCAGTCAACAAAGCCAATTATTGACTTATATGAAGAAATGGGAAAAGTCAA
GAAAATAGATGCATCCAGATCTGTTGATGAAGTGTTTGATGAAGTTATGAAGATTTTTGATAAAGAAGGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 52 .69 RPM |
| SRP017611_kidney | 59 .04 RPM |
| SRP017611_liver | 65 .46 RPM |
| SRP040447_lung | 35 .46 RPM |
| SRP040447_skeletal_muscle | 12 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000004030 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004014 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017375 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000012394 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028719 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007775 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000003885 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_417 | 70.00 | 56.19 | Please wait, loading  |
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| 2. | retro_cpor_799 | 68.91 | 55.71 | Please wait, loading |
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| 3. | retro_cpor_1070 | 70.59 | 55.71 | Please wait, loading |
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| 4. | retro_cpor_1295 | 70.83 | 56.19 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000014747 retrocopies