Parental gene:

RPS24, ENSCPOG00000020096

Aliases:None
Description:ribosomal protein S24 [Source:HGNC Symbol;Acc:10411]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_15:26211354..26213218(+)


>ENSCPOG00000020096
CAGAATGACACAGTAACCATCCGGACCCGGAAGTTCATGACTAACCGACTCCTCCAGAGGAAGCAAATGGTTATTGACGT
CCTTCACCCTGGGAAAGCAACAGTACCTAAGACAGAAATTCGGGAAAAACTTGCCAAAATGTACAAGACAACCCCAGATG
TCATTTTTGTGTTTGGATTCAGAACCCATTTTGGAGGTGGCAAGACAACCGGTTTTGGCATGATTTATGATTCCTTGGAT
TATGCAAAGAAAAATGAACCCAAACATAGACTTGCAAGACACGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAACAGCG
GAAGGAGCGCAAGAACAGAATGAAGAAAGTCAGGGGCACTGCGAAGGCTAATGTTGGGGCTGGCAAAAAGGTACAGATCG
CA

Library Parental gene expression (RPM)
SRP017611_brain 228 .23 RPM
SRP017611_kidney 255 .33 RPM
SRP017611_liver 152 .39 RPM
SRP040447_lung 260 .66 RPM
SRP040447_skeletal_muscle 206 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017818 ortholog_one2one 17 retrogenes
retro_amel_1043, retro_amel_1258, retro_amel_1303, retro_amel_1397, retro_amel_145, retro_amel_1814, retro_amel_1832, retro_amel_225, retro_amel_24, retro_amel_251, retro_amel_328, retro_amel_331, retro_amel_515, retro_amel_718, retro_amel_768, retro_amel_81, retro_amel_886,
Dipodomys ordii ENSDORG00000000189 possible_ortholog 4 retrogenes
retro_dord_248, retro_dord_498, retro_dord_717, retro_dord_766,
Felis catus ENSFCAG00000000849 ortholog_one2one 3 retrogenes
retro_fcat_19, retro_fcat_772, retro_fcat_85,
Gadus morhua ENSGMOG00000012595 ortholog_many2many 1 retrogene
retro_gmor_15,
Loxodonta africana ENSLAFG00000027878 ortholog_one2one 10 retrogenes
retro_lafr_1017, retro_lafr_190, retro_lafr_303, retro_lafr_340, retro_lafr_439, retro_lafr_558, retro_lafr_596, retro_lafr_669, retro_lafr_854, retro_lafr_995,
Myotis lucifugus ENSMLUG00000024102 possible_ortholog 1 retrogene
retro_mluc_260,
Mustela putorius furo ENSMPUG00000003778 possible_ortholog 1 retrogene
retro_mputfur_10,
Mus musculus ENSMUSG00000025290 possible_ortholog 13 retrogenes
retro_mmus_1101, retro_mmus_1462, retro_mmus_1589, retro_mmus_1592, retro_mmus_1599, retro_mmus_2134, retro_mmus_2332, retro_mmus_2497, retro_mmus_2984, retro_mmus_3162, retro_mmus_321, retro_mmus_3233, retro_mmus_602,
Oryctolagus cuniculus ENSOCUG00000012472 possible_ortholog 1 retrogene
retro_ocun_16,
Rattus norvegicus ENSRNOG00000010189 ortholog_one2one 1 retrogene
retro_rnor_206,
Tarsius syrichta ENSTSYG00000006715 possible_ortholog 1 retrogene
retro_tsyr_1919,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_14 90.98 91.04
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2. retro_cpor_923 69.42 87.31
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3. retro_cpor_1333 59.48 85.07
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Download FASTA sequences of all ENSCPOG00000020096 retrocopies