Parental gene:

ENSDNOG00000011403

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3801:9222..12415(-)


>ENSDNOG00000011403
ATGGCGGCTGCTCTCATTTTTAGATCTTTGCGGAGGACGGGAGCTGAGCCACTGTTGCGAGGAGAAGTCCGGGAACTACT
CTGGTCGCGACATGGAGCGGGCACCCCCGGCCCAGAGCGCGACTTCAGCCTCTCTCATAATCTGGGCACGGTCATCGTAG
AGCGCTGGTGGAAGGTGCCCCTGGCCGGGGAAGGCCGGAAGCCGCGCTTGCACCGGAGACATCGCGTCTACAAGCTGGTG
GAGGACACGAAACACCGACCCAAAGAGAACTTGGAGCTCATTCTCACGCAGTCTGTGGAGGAAATTGGAGTTCGGGGTGA
CCTGGTCTCAGTGAAGAAATCCTTGGCCCGTAATCGACTCCTTCCTCAGGGATTGGCTGTATATGCATCCCCTGAAAACA
AGAAGCTGTTTGAAGAGGAGAAATCGCTGAGACAAGAAGGAAAATTAGAGAAGATCCAAACCATGGCAGGTGAGGCGACA
GTGAAATTTTTGAGAAGCTGTCACCTGGAGGTGGGAATGAAGAACAACGTCAAATGGGAGCTAAATCCTGAAATAGTTGC
CCGCCACTTCCTTAAGAATCTTGGTGTTGTGGTAGCCCCACATGCATTAAAGTTACCAGAAGAGCCCATCACACGGTGGG
GCGAGTACTGGTGTGAGGTGACGGTAAATGGCCTTGACACTGTGAGGGTACCTATGTCCGTGGTGAACTTTGAGAGGCCC
AAGACCAAAAGATATAAATACTGGTTAGCTCAGCAAGCTGCCAAGGGAACGGCCCCCACCAACTCTCAGGTGCTCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 32 .48 RPM
SRP012922_cerebellum 19 .93 RPM
SRP012922_heart 18 .33 RPM
SRP012922_kidney 27 .93 RPM
SRP012922_liver 13 .78 RPM
SRP012922_lung 17 .72 RPM
SRP012922_quadricep_muscle 18 .69 RPM
SRP012922_spleen 20 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000258 ortholog_one2many 1 retrogene
retro_chof_10,
Homo sapiens ENSG00000143436 possible_ortholog 1 retrogene
retro_hsap_4078,
Gorilla gorilla ENSGGOG00000001902 possible_ortholog 1 retrogene
retro_ggor_2735,
Loxodonta africana ENSLAFG00000006271 ortholog_many2many 2 retrogenes
retro_lafr_498, retro_lafr_563,
Nomascus leucogenys ENSNLEG00000010275 possible_ortholog 1 retrogene
retro_nleu_2045,
Oryctolagus cuniculus ENSOCUG00000001383 possible_ortholog 1 retrogene
retro_ocun_725,
Otolemur garnettii ENSOGAG00000030456 possible_ortholog 1 retrogene
retro_ogar_159,
Pongo abelii ENSPPYG00000000857 possible_ortholog 1 retrogene
retro_pabe_3347,
Pan troglodytes ENSPTRG00000001295 possible_ortholog 2 retrogenes
retro_ptro_2765, retro_ptro_2996,
Vicugna pacos ENSVPAG00000000664 possible_ortholog 1 retrogene
retro_vpac_123,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1989 62.50 68.30
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000011403 retrocopies