Parental gene: | RPLP2, ENSDNOG00000011513 |
| Aliases: | None |
| Description: | ribosomal protein, large, P2 [Source:HGNC Symbol;Acc:10377] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_182244:311..1560(-) |
>ENSDNOG00000011513
GTCATCAGTGAGCTAAATGGAAAAAACATTGAAGATGTAATTGCCCAGGGCATTGGCAAGCTGGCCAGCGTGCCTGCCGG
TGGAGCTGTGGCCGTGGCCGCCGCCCCGGGCTCTGCCGCTCCTGCTGCCAGCTCGGCCCCAGCTGCAGCAGAGGAAAAGA
AAGACGAAAAGAAGGAGGAATCGGAAGAGTCGGATGACGATATGGGATTTGGCTTGTTTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 146 .43 RPM |
| SRP012922_cerebellum | 56 .09 RPM |
| SRP012922_heart | 86 .78 RPM |
| SRP012922_kidney | 148 .40 RPM |
| SRP012922_liver | 63 .47 RPM |
| SRP012922_lung | 186 .17 RPM |
| SRP012922_quadricep_muscle | 121 .68 RPM |
| SRP012922_spleen | 181 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001777 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000009523 | possible_ortholog | 1 retrogene | |
| Ciona intestinalis | ENSCING00000000626 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000008417 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020627 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026860 | possible_ortholog | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016296 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000002116 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001056 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012842 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_143 | 77.27 | 87.84 | Please wait, loading  |
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| 2. | retro_dnov_200 | 65.33 | 100.00 | Please wait, loading |
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| 3. | retro_dnov_335 | 86.49 | 100.00 | Please wait, loading |
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| 4. | retro_dnov_366 | 65.79 | 100.00 | Please wait, loading |
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| 5. | retro_dnov_1464 | 75.00 | 95.95 | Please wait, loading |
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| 6. | retro_dnov_1498 | 79.73 | 97.30 | Please wait, loading |
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| 7. | retro_dnov_1522 | 87.84 | 100.00 | Please wait, loading |
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| 8. | retro_dnov_1655 | 82.89 | 100.00 | Please wait, loading |
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| 9. | retro_dnov_1693 | 76.32 | 97.30 | Please wait, loading |
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| 10. | retro_dnov_1768 | 71.62 | 97.30 | Please wait, loading |
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| 11. | retro_dnov_2104 | 59.21 | 95.95 | Please wait, loading |
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| 12. | retro_dnov_2293 | 63.24 | 91.89 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000011513 retrocopies