Parental gene: | SERP1, ENSDNOG00000013995 |
| Aliases: | None |
| Description: | stress-associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:10759] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6832:251025..252611(-) |
>ENSDNOG00000013995
ATGGTCGCCAAGCAGCGGATCCGTATGGCCAACGAGAAGCACAGCAAGAACATCACCCAGCGCGGCAACGTCGCCAAGAC
CTCGAGAAATGCCCCCGAAGAGAAGGCATCCGTAGGACCCTGGTTATTGGCTCTCTTCATTTTTGTGGTTTGTGGCTCTG
CAATTTTCCAGATTATTCAAAGTATCAGGATGGGCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 43 .76 RPM |
| SRP012922_cerebellum | 11 .96 RPM |
| SRP012922_heart | 2 .78 RPM |
| SRP012922_kidney | 18 .62 RPM |
| SRP012922_liver | 33 .28 RPM |
| SRP012922_lung | 49 .18 RPM |
| SRP012922_quadricep_muscle | 1 .21 RPM |
| SRP012922_spleen | 55 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000000414 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016085 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_856 | 72.06 | 100.00 | Please wait, loading  |
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| 2. | retro_dnov_1100 | 63.77 | 98.48 | Please wait, loading |
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| 3. | retro_dnov_1145 | 52.24 | 100.00 | Please wait, loading |
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| 4. | retro_dnov_1170 | 53.03 | 98.48 | Please wait, loading |
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| 5. | retro_dnov_1416 | 71.64 | 100.00 | Please wait, loading |
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| 6. | retro_dnov_1500 | 57.35 | 98.48 | Please wait, loading |
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| 7. | retro_dnov_1524 | 75.76 | 100.00 | Please wait, loading |
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| 8. | retro_dnov_1533 | 57.58 | 98.48 | Please wait, loading |
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| 9. | retro_dnov_1649 | 69.70 | 98.48 | Please wait, loading |
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| 10. | retro_dnov_1715 | 55.88 | 100.00 | Please wait, loading |
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| 11. | retro_dnov_1724 | 53.03 | 98.48 | Please wait, loading |
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| 12. | retro_dnov_1746 | 57.35 | 98.48 | Please wait, loading |
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| 13. | retro_dnov_1784 | 59.09 | 98.48 | Please wait, loading |
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| 14. | retro_dnov_1847 | 53.03 | 98.48 | Please wait, loading |
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| 15. | retro_dnov_2299 | 60.61 | 98.48 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000013995 retrocopies