Parental gene: | ENSECAG00000005108 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 20:34516655..34517717(-) |
>ENSECAG00000005108
ATGAGGAACACCACAGTTCCCAATGCCCCCCAGGCCAACAGTGACTCCATGGTGGGCTATGTGCTGGGGCCTTTCTTCCT
CATCACCTTGGTCGGGGTGGTGGTGGCTGTGGTAATGTATGTCCAGAAGAAAAAGCGGGTGGACCGGCTTCGCCATCACC
TGCTCCCCATGTACAGCTATGACCCTGCTGAGGAGCTACATGAGGCTGAGCAGGAGCTGCTCTCTGATGTGGGAGACCCC
AAGGTGGTACACGGCTGGCAGAGTGGCTACCAGCACAAGCGGATGCCCTTGCTGGATGTCAAGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_articular_cartilage | 1 .30 RPM |
| SRP021940_cerebellum | 10 .65 RPM |
| SRP021940_embryo | 2 .25 RPM |
| SRP021940_placental_villous | 5 .10 RPM |
| SRP021940_synovial_membrane | 3 .68 RPM |
| SRP021940_testis | 3 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001058 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000034519 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011876 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000062753 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013398 | ortholog_one2one | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000004692 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_236 | 71.43 | 54.90 | Please wait, loading  |
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| 2. | retro_ecab_474 | 81.82 | 97.06 | Please wait, loading |
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| 3. | retro_ecab_700 | 68.00 | 73.53 | Please wait, loading |
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Download FASTA sequences of all ENSECAG00000005108 retrocopies