Parental gene: | MTMR1, ENSECAG00000007323 |
| Aliases: | None |
| Description: | myotubularin related protein 1 [Source:HGNC Symbol;Acc:7449] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | X:119662123..119721830(+) |
>ENSECAG00000007323
AGTCCTACAGGATCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACAATTTCTAGTCAGATTTCAGGTTCAGTGAC
ATCAGAAAATGTATCCAGAGATTACAAGGCTCTAAGGGATGGAAATAAGCTGGCACAGATGGAAGAAGCACCACTTTTTC
CAGGAGAGTCGATCAAGGCCATTGTGAAAGACGTCATGTATATCTGCCCATTTATGGGAGCAGTGAGTGGAACCCTGACA
GTGACTGACTTCAAGATGTACTTCAAAAATGTAGAGAGGGACCCGCATTTCGTCCTTGATGTTCCCCTGGGAGTGATCAG
CAGAGTTGAGAAGATTGGCGCGCAGAGCCACGGGGACAATTCTTGTGGTATAGAGATCGTGTGCAAGGATATGAGGAACT
TGCGACTGGCTTATAAACAGGAAGAACAGAGTAAACTGGGGATATTTGAAAACCTCACCAAACATGCATTTCCTCTTTCC
AACGGACAGGCACTCTTTGCATTCAACTATAAAGAGAAATTTCCAATTAATGGATGGAAAGTTTATGATCCAGTATCTGA
ATATAAGAGACAGGGCTTGCCAAATGAGAGTTGGAAAATATCCAAAGTAAACAGTAATTATGAGCTCTGTGACACCTACC
CTGCCATCATTGTTGTGCCAACTAGTGTGAAAGATGATGACCTTTCAAAAGTGGCAGCCTTTCGAGCAAAAGGCAGAGTC
CCTGTGTTGTCATGGATTCATCCAGAAAGTCAGGCAACGATTACCCGTTGCAGCCAGCCACTTGTGGGTCCCAATGATAA
ACGCTGCAAAGAAGATGAAAAATACTTGCAAACAATAATGGACGCTAATGCACAGTCTCACAAACTTATCATCTTTGATG
CCCGACAAAACAGTGTTGCTGATACTAACAAGGCAAAGGGTGGAGGATATGAAAGTGAAAGTGCTTACCCCAACGCAGAA
CTCGTGTTCTTGGAGATCCACAACATTCACGTGATGAGAGAGTCACTACGTAAATTGAAAGAGATCGTGTACCCTTCCAT
CGATGAGGCACGGTGGCTGTCCAACGTGGATGGGACGCATTGGCTAGAGTATATAAGGATGCTTCTTGCTGGGGCAGTAA
GAATTGCTGATAAAATAGAATCTGGGAAAACTTCGGTGGTGGTGCATTGCAGCGATGGTTGGGACCGAACAGCCCAGCTG
ACGTCTCTGGCCATGCTGATGTTGGACAGTTATTATCGTACCATTAAAGGGTTCGAGGCTCTCATAGAAAAGGAGTGGAT
CAGCTTTGGACATAAGTTTGCACTGCGTGTGGGCCATGGCAATGACAACCACGCGGATGCTGACCGATCCCCAATATTTC
TTCAGTTTATTGATTGTGTTTGGCAAATGACAAGACAGTTTCCTTCAGCATTCGAGTTTAATGAACTATTCTTGATTACA
ATTTTGGATCACCTTTATAGCTGTCTCTTTGGGACTTTCTTGTGCAACTGTGAAGAGCAGCGAGTCAAAGAGGATGTATA
TACAAAGACTATATCTTTATGGTCTTATATCAATAGCCAGCTCGATGAATTTTCTAATCCCTTCTTTGTGAATTATGAAA
ACCACGTCTTATATCCTGTTGCTAGTCTGAGTCATTTGGAATTGTGGGTAAACTATTATGTGCGATGGAATCCACGAATG
AGGCCTCAGATGCCCATCCACCAGACCCTCAAGGAGCTGCTGGCCGTCCGCGCGGAGCTGCAGAAGAGGGTGGAGGACCT
GCAGCGGGAGGTGGCCACGCGTGCCTCGTCCTCGTCCGAGCGGGGCTCCTCGCCGTCCCACTCGGTCACCCCCGTCCACA
CCTCGGTCTGA
AGTCCTACAGGATCACATGTTGAATGGTGTAAACAGCTTATAGCTGCTACAATTTCTAGTCAGATTTCAGGTTCAGTGAC
ATCAGAAAATGTATCCAGAGATTACAAGGCTCTAAGGGATGGAAATAAGCTGGCACAGATGGAAGAAGCACCACTTTTTC
CAGGAGAGTCGATCAAGGCCATTGTGAAAGACGTCATGTATATCTGCCCATTTATGGGAGCAGTGAGTGGAACCCTGACA
GTGACTGACTTCAAGATGTACTTCAAAAATGTAGAGAGGGACCCGCATTTCGTCCTTGATGTTCCCCTGGGAGTGATCAG
CAGAGTTGAGAAGATTGGCGCGCAGAGCCACGGGGACAATTCTTGTGGTATAGAGATCGTGTGCAAGGATATGAGGAACT
TGCGACTGGCTTATAAACAGGAAGAACAGAGTAAACTGGGGATATTTGAAAACCTCACCAAACATGCATTTCCTCTTTCC
AACGGACAGGCACTCTTTGCATTCAACTATAAAGAGAAATTTCCAATTAATGGATGGAAAGTTTATGATCCAGTATCTGA
ATATAAGAGACAGGGCTTGCCAAATGAGAGTTGGAAAATATCCAAAGTAAACAGTAATTATGAGCTCTGTGACACCTACC
CTGCCATCATTGTTGTGCCAACTAGTGTGAAAGATGATGACCTTTCAAAAGTGGCAGCCTTTCGAGCAAAAGGCAGAGTC
CCTGTGTTGTCATGGATTCATCCAGAAAGTCAGGCAACGATTACCCGTTGCAGCCAGCCACTTGTGGGTCCCAATGATAA
ACGCTGCAAAGAAGATGAAAAATACTTGCAAACAATAATGGACGCTAATGCACAGTCTCACAAACTTATCATCTTTGATG
CCCGACAAAACAGTGTTGCTGATACTAACAAGGCAAAGGGTGGAGGATATGAAAGTGAAAGTGCTTACCCCAACGCAGAA
CTCGTGTTCTTGGAGATCCACAACATTCACGTGATGAGAGAGTCACTACGTAAATTGAAAGAGATCGTGTACCCTTCCAT
CGATGAGGCACGGTGGCTGTCCAACGTGGATGGGACGCATTGGCTAGAGTATATAAGGATGCTTCTTGCTGGGGCAGTAA
GAATTGCTGATAAAATAGAATCTGGGAAAACTTCGGTGGTGGTGCATTGCAGCGATGGTTGGGACCGAACAGCCCAGCTG
ACGTCTCTGGCCATGCTGATGTTGGACAGTTATTATCGTACCATTAAAGGGTTCGAGGCTCTCATAGAAAAGGAGTGGAT
CAGCTTTGGACATAAGTTTGCACTGCGTGTGGGCCATGGCAATGACAACCACGCGGATGCTGACCGATCCCCAATATTTC
TTCAGTTTATTGATTGTGTTTGGCAAATGACAAGACAGTTTCCTTCAGCATTCGAGTTTAATGAACTATTCTTGATTACA
ATTTTGGATCACCTTTATAGCTGTCTCTTTGGGACTTTCTTGTGCAACTGTGAAGAGCAGCGAGTCAAAGAGGATGTATA
TACAAAGACTATATCTTTATGGTCTTATATCAATAGCCAGCTCGATGAATTTTCTAATCCCTTCTTTGTGAATTATGAAA
ACCACGTCTTATATCCTGTTGCTAGTCTGAGTCATTTGGAATTGTGGGTAAACTATTATGTGCGATGGAATCCACGAATG
AGGCCTCAGATGCCCATCCACCAGACCCTCAAGGAGCTGCTGGCCGTCCGCGCGGAGCTGCAGAAGAGGGTGGAGGACCT
GCAGCGGGAGGTGGCCACGCGTGCCTCGTCCTCGTCCGAGCGGGGCTCCTCGCCGTCCCACTCGGTCACCCCCGTCCACA
CCTCGGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 10 .57 RPM |
| SRP021940_embryo | 16 .88 RPM |
| SRP021940_cerebellum | 21 .03 RPM |
| SRP021940_testis | 3 .77 RPM |
| SRP021940_placental_villous | 16 .50 RPM |
| SRP021940_articular_cartilage | 6 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000013433 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012257 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_527 | 93.04 | 69.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000007323 retrocopies