Parental gene:

FKBP3, ENSECAG00000018299

Aliases:None
Description:FK506 binding protein 3, 25kDa [Source:HGNC Symbol;Acc:3719]
Organism:Horse (Equus caballus)
Coordinates:1:180081873..180093124(-)


>ENSECAG00000018299
TTTCTTGCAGAACATAAGTTATTAGGAAACATTAAAAATGTGGCTAAGACAGCTAACAAGGACCATTTGGTAACAGCCTA
TAACCATCTTTTTGAAAGTAAGCGTTTCAAGGGCACTGAAAGTGTAAGTAAAGTGTCCGAGCAGGTGAAAAATGTGAAGC
TTAATGAAGATAAACCCAAAGAAACCAAGTCTGAAGAGACTCTGGATGAGGGTCCACCAAAATACACAAAATCTGTTCTT
AAAAAAGGAGATAAAACCAACTTTCCCAAAAAGGGAGATGTTGTCCACTGCTGGTATACAGGAACATTACAGGATGGCAC
TGTTTTTGATACTAATATTCAAACAAGTTCAAAGAAGAAGAAAAATGCCAAGCCTTTAAGTTTTAAGGTTGGAATAGGCA
AAGTTATCAGAGGATGGGATGAAGCACTCCTGACCATGAGTAAAGGAGAAAAGGCTCGACTGGAGATTGAACCAGAATGG
GCTTATGGAAAGAAAGGACAGCCTGATGCCAAAATTCCACCAAATGCAAAACTCATTTTTGAAGTGGAATTAGTGGATAT
TGATTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 7 .50 RPM
SRP021940_cerebellum 15 .68 RPM
SRP021940_embryo 41 .86 RPM
SRP021940_placental_villous 17 .85 RPM
SRP021940_synovial_membrane 10 .98 RPM
SRP021940_testis 29 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014018 possible_ortholog 4 retrogenes
retro_cfam_1788, retro_cfam_440, retro_cfam_616, retro_cfam_798,
Choloepus hoffmanni ENSCHOG00000000189 ortholog_one2one 1 retrogene
retro_chof_2315,
Equus caballus ENSECAG00000015664 other_paralog 1 retrogene
retro_ecab_752,
Echinops telfairi ENSETEG00000003358 ortholog_one2one 8 retrogenes
retro_etel_1114, retro_etel_1484, retro_etel_1491, retro_etel_1499, retro_etel_1774, retro_etel_2130, retro_etel_2200, retro_etel_997,
Loxodonta africana ENSLAFG00000003572 possible_ortholog 2 retrogenes
retro_lafr_357, retro_lafr_76,
Macropus eugenii ENSMEUG00000004962 ortholog_one2one 1 retrogene
retro_meug_679,
Monodelphis domestica ENSMODG00000007352 ortholog_one2one 1 retrogene
retro_mdom_1554,
Otolemur garnettii ENSOGAG00000003012 possible_ortholog 2 retrogenes
retro_ogar_2247, retro_ogar_3472,
Procavia capensis ENSPCAG00000011316 ortholog_one2one 2 retrogenes
retro_pcap_454, retro_pcap_78,
Tupaia belangeri ENSTBEG00000006017 ortholog_one2one 13 retrogenes
retro_tbel_1032, retro_tbel_1125, retro_tbel_1696, retro_tbel_1783, retro_tbel_2151, retro_tbel_2569, retro_tbel_3297, retro_tbel_3567, retro_tbel_3807, retro_tbel_4222, retro_tbel_4482, retro_tbel_730, retro_tbel_800,
Tarsius syrichta ENSTSYG00000002125 ortholog_one2one 2 retrogenes
retro_tsyr_515, retro_tsyr_820,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_352 53.61 86.70
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2. retro_ecab_565 75.89 74.47
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Download FASTA sequences of all ENSECAG00000018299 retrocopies