Parental gene:

EIF4E2, ENSECAG00000020187

Aliases:None
Description:eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:3293]
Organism:Horse (Equus caballus)
Coordinates:6:19593095..19607277(+)


>ENSECAG00000020187
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAGCGGAACGAGACAAGAGTCAGGGCAGCAGCAAGAGGAAGGCTGTTGTCCCAGGACCAGCAGAGC
ATCCCCTGCAGTACAACTACACTTTCTGGTACTCCAGGAGAACCCCCGGCCGGCCTACCAGCTCACAGAGCTACGAACAG
AACATCAAACAGATCGGCACCTTTGCCTCTGTGGAACAGTTCTGGAGGTTTTACAGCCACATGGTACGTCCCGGGGACCT
GACGGGCCACAGTGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGTGGCA
AGTGGATTATTCGGCTGCGAAAGGGCTTGGCATCCCGTTGCTGGGAGAATCTCATCCTGGCCATGTTGGGGGAGCAGTTC
ATGGTTGGGGAGGAGATCTGTGGGGCTGTGGTCTCTGTCCGGTTCCAGGAGGACATTATTTCAATATGGAATAAGACTGC
CAGCGACCAAGCAACCACAGCCCGAATCCGGGATACACTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAAATGCCAGGCAGGCTGGGCCCCCAAAGGCTCCTTTTTCAAAACCTCTGGAAGCCG
CGGTTGAATGTGCCATG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 7 .61 RPM
SRP021940_cerebellum 11 .48 RPM
SRP021940_embryo 17 .08 RPM
SRP021940_placental_villous 17 .99 RPM
SRP021940_synovial_membrane 10 .84 RPM
SRP021940_testis 9 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011328 possible_ortholog 1 retrogene
retro_cfam_183,
Callithrix jacchus ENSCJAG00000013786 ortholog_one2one 2 retrogenes
retro_cjac_1061, retro_cjac_2717,
Homo sapiens ENSG00000135930 ortholog_one2one 1 retrogene
retro_hsap_2689,
Microcebus murinus ENSMICG00000015082 possible_ortholog 2 retrogenes
retro_mmur_806, retro_mmur_975,
Myotis lucifugus ENSMLUG00000011269 possible_ortholog 1 retrogene
retro_mluc_60,
Pan troglodytes ENSPTRG00000013043 ortholog_one2one 1 retrogene
retro_ptro_1816,
Sarcophilus harrisii ENSSHAG00000013108 ortholog_one2one 1 retrogene
retro_shar_101,
Tupaia belangeri ENSTBEG00000004455 ortholog_one2one 11 retrogenes
retro_tbel_1299, retro_tbel_2197, retro_tbel_2623, retro_tbel_2680, retro_tbel_3932, retro_tbel_4471, retro_tbel_4622, retro_tbel_536, retro_tbel_616, retro_tbel_650, retro_tbel_714,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_300 95.49 99.59
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2. retro_ecab_847 65.62 75.51
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Download FASTA sequences of all ENSECAG00000020187 retrocopies