Parental gene:

TSPAN17, ENSECAG00000022322

Aliases:None
Description:tetraspanin 17 [Source:HGNC Symbol;Acc:13594]
Organism:Horse (Equus caballus)
Coordinates:14:5496852..5501868(-)


>ENSECAG00000022322
GGCTGTTGGTGCCTCACCCTCAGCTCTTTGCTGCTGCTTCTGCAGGTGCTGGGAGCCCTGTTTCTGGCCATCGGCCTCTG
GGCCTGGGGTGAGAAGGGCGTTCTCTCCAACCTCTCGGCGCTGACAGATCTGGGAGGCCTTGACCCCGTGTGGCTGTTTG
TAGTAGTGGGAGGCATCATGTCTGTGCTGGGCTTTGCTGGCTGCATAGGGGCTCTCCGGGAGAACACCTTCCTGCTCAAG
TTTTTCTCCGTGTTCCTTGGCCTCATCTTCTTCCTGGAGCTGGCGACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGAT
TCGAGACCAGCTCAACCTCTTCATCAACAACAACGTCAAGGCCTATCGGGACGACATTGACCTCCAGAACCTCATTGACT
TTGCTCAGGAATACTGGTCTTGCTGCGGAGCCCGAGGGCCCAACGACTGGAACCTCAATATCTACTTCAACTGCACTGAC
TTGAACCCGAGCCGGGAGCGCTGCGGGGTGCCCTTCTCTTGCTGCGTCAGGGACCCTGCGGAAGATGTCCTCAACACCCA
GTGCGGCTACGATGTCCGGCTCAAACTGGAGCTGGAGCAGCAGGGCTCTATCCACACCAAAGGCTGTGTGGGCCAGTTCG
AGAAGTGGCTGCAGGACAACCTGATCGTCGTGGCTGGGGTCTTTGTGGGCATCGCCCTCCTCCAGATCTTCGGTATCTGC
CTGGCCCAGAACCTCGTGAGCGACATCAAGGCAGTGAAGGCC

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 3 .84 RPM
SRP021940_cerebellum 13 .35 RPM
SRP021940_embryo 24 .19 RPM
SRP021940_placental_villous 19 .82 RPM
SRP021940_synovial_membrane 19 .63 RPM
SRP021940_testis 23 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007218 ortholog_one2one 2 retrogenes
retro_amel_1365, retro_amel_979,
Canis familiaris ENSCAFG00000016638 ortholog_one2one 2 retrogenes
retro_cfam_1585, retro_cfam_704,
Callithrix jacchus ENSCJAG00000007278 ortholog_one2one 1 retrogene
retro_cjac_2289,
Felis catus ENSFCAG00000007803 ortholog_one2many 1 retrogene
retro_fcat_1133,
Mustela putorius furo ENSMPUG00000012505 ortholog_one2one 1 retrogene
retro_mputfur_428,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_554 96.04 79.53
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Download FASTA sequences of all ENSECAG00000022322 retrocopies