Parental gene:

RAB5B, ENSECAG00000023306

Aliases:None
Description:RAB5B, member RAS oncogene family [Source:HGNC Symbol;Acc:9784]
Organism:Horse (Equus caballus)
Coordinates:6:73680871..73695204(+)


>ENSECAG00000023306
ATGACTAGCAGAAGCACAGCCAGGCCCAATGGGCAGCCCCAGGCCAGCAAAATATGCCAGTTCAAATTGGTCCTGCTGGG
TGAATCTGCAGTGGGGAAGTCTAGCCTGGTGTTACGATTTGTCAAAGGGCAGTTCCATGAGTACCAAGAGAGCACCATTG
GAGCGGCCTTCCTCACCCAGTCTGTCTGTCTAGATGACACAACAGTCAAGTTTGAGATCTGGGACACAGCTGGGCAGGAG
CGATACCATAGCTTGGCCCCTATGTACTACAGAGGTGCCCAAGCTGCAATTGTGGTTTATGACATTACTAATCAGGAAAC
CTTCGCTCGAGCAAAGACATGGGTAAAGGAACTACAGCGACAGGCCAGTCCTAGCATCGTTATTGCCCTGGCAGGGAACA
AAGCTGACCTGGCCAACAAGCGCATGGTGGAGTATGAAGAGGCCCAGGCGTATGCAGATGACAACAGTTTATTGTTTATG
GAGACTTCAGCCAAGACAGCTATGAACGTGAACGACCTCTTCCTGGCAATAGCTAAGAAGTTGCCAAAGAGTGAACCCCA
GAATCCAGGGGGTGCAGCAGGCCGAAGCCGGGGTGTGGATCTCCATGAGCAGTCCCAGCAGAACAAGAGCCAGTGTTGTA
GCAACTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .71 RPM
SRP021940_cerebellum 3 .53 RPM
SRP021940_embryo 96 .97 RPM
SRP021940_placental_villous 89 .68 RPM
SRP021940_synovial_membrane 77 .17 RPM
SRP021940_testis 83 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007527 ortholog_one2one 2 retrogenes
retro_cjac_1215, retro_cjac_1879,
Dasypus novemcinctus ENSDNOG00000016952 ortholog_one2one 1 retrogene
retro_dnov_350,
Echinops telfairi ENSETEG00000009603 ortholog_one2one 2 retrogenes
retro_etel_617, retro_etel_698,
Mus musculus ENSMUSG00000000711 ortholog_one2one 1 retrogene
retro_mmus_2081,
Nomascus leucogenys ENSNLEG00000017570 ortholog_one2one 1 retrogene
retro_nleu_2531,
Oryctolagus cuniculus ENSOCUG00000013895 ortholog_one2one 1 retrogene
retro_ocun_1193,
Ochotona princeps ENSOPRG00000007883 ortholog_one2one 3 retrogenes
retro_opri_1061, retro_opri_1116, retro_opri_299,
Procavia capensis ENSPCAG00000010486 ortholog_one2many 1 retrogene
retro_pcap_380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_280 78.52 62.79
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Download FASTA sequences of all ENSECAG00000023306 retrocopies