Parental gene: | ENSECAG00000023794 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 10:22561094..22662066(+) |
>ENSECAG00000023794
CAGGTGCTGTTGACTTTCAGGGACGTGGCCATAGAGTTCTCGCCAGAGGAGTGGGAATGCCTGGACCCCGCTCAGAGGGC
CTTGTACAGGGACGTGATGCTGGAGAACTACAGGAACCTGCTCTCCCTGGCAGCAGTTTCCCCAAAACCTTACTTAAGAA
CATGTGGCCAGAACCTGCAGGCCCAGGTTCAAATCTTGGCTCTCAAATTTACTTTCTGTGTGAATTATGAAAAGCCTTAC
AAATGCAATGCTTGTGAGAAGGCTTTTAGAGAAAGCTCAAACCTTGCTAGTCACCAGAGAATTCTTTCTGGGCAGAGACC
TTACAAATGTAATGAGTGTGGCAAAGCATTTACCCAATTTGCAAACCTTTCTAGACATCTGAGACTCCATACCAGAGAGA
AACCATATAAATGTGATATATGTGGCAAGGGCTGTAGTCAAAATGCAAATCTTGCAAGTCATCAGAAAATCCATACTGGG
GAGAGACCTTACAAATGTAATGAGTGTGGCAAAGCCTTGTCCGAGCGTTCAAGCCTTACTCAGCATAAGAGAATCCATAC
TGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTTGAATCTCACTAATCATCAGAGAATTC
ATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAACCGCATCTCACACCTCACTAGACACCAGAGA
ATCCATACTGGAGAGAAACCTTATAAATGTAACATGTGTGGCAAGGTCTGTAGTCAACATTCAAATCTTCTAAGTCATCA
GAGAATTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTCGAATCTCACTAATC
ATCAGAGAATTCATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAGCCGCATCTCACACCTCACT
AGACACCAGAGAATCCATACTGGAGAGAAACCTTATAAATGTAACGTGTGTGGCAAGGTCTGTAGTCAACATTCAAATCT
TACAATTCATCAGAGAACTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGCAAAGCCTTTATGGAGCGTTCAA
GCCTTACTCAACATACGAGAATCCATAGTGGAGAGAAGCCTTACTCGTGTAAAGAATGTGGCAAAGCCTTTAACCAGTCC
TCTAACCTTGTCATACATCAAATAATTCATACTGGAGAGAAGCCATACAAATGCAATGTGTGTGGCAAAGCCTTTAATGT
GTGTTCAAGCCTTACCCGTCATCAGACAATCCATACTGGGGAGAAGCCTTACAAATGTACTGTATGTCACCAGGTTTTTA
TGCATCCTGCATTGCTCACAGAACACCAGAAAACACGCGTTAGAGAAAAACCTTACAAGTGTAACGAGTGTGGGAAGGCT
TTTAGCCACTGCTCAACCTTAGCTAATCACCAAAGAATTCATTCTGATGAGAGACCTTACAAATGTAATGAGTGTGGCAG
AGCCTTTAACAGGTTCTCAAACCTCACAAGGCATCAGAGAATTCATACTGGGGAGAAACCATATAAATGTAATGTGTGTG
GTAAGGATTTTATGATACGTTCACACCTTTGGAGTCATGAGCGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAG
TGTGGCAAAGCCTTTTCTGAGCGTTCAAATCTTGCTCAACACAAGAGAATCCATACTGGAGAGAAACCTTACAAATGTAA
CGAATGTGGTAAGGATTTTACCACACGTTCACACCTTTGGGGTCATGAGAGGATTCATACTGGAGAGAAGCCTTACAAAT
GTAATGAGTGTGGCAAAGCCTTCACCGGGAGTTCAAATCTTACTCAACATAAGAAAATTCATACTGGAGAGAAACCATAT
AAATGTACTGTATGTGGCAAGGCCTTTAGTCAGAATTCAAGCCTTATAGTTCATCAAAGAATTCATACTGGGGAGAAGCC
TTACAAATGTCATGAATGTGGCAAAGCCTTTAAGCAGTACTCGAGCCTCAATAGACACCAGAATATACATGGAGGAGAAC
AACCAAACACATGTAATCACTGTGGGAAAGCCTTTCATCAATCATCAACTCTAAAAAGACGTACGAAAATCCATACTGAA
GAGAGACCATACAAATGTAAAGAATGTGGGAAAGCCTTCAACCGGTACTCAAACTTCACTATACATCAGAGAATTCATAC
TGGAGAGAAACCTTACAAATGTAAAGAATGTGGCCAAGCCTTCACCTGGTGCTCATCCCTTACTATACATCAGAGAATTC
ACACTGGAGAGAAGCCTTACAAATGTAAAGTATGTTGCAAAGCCTTCAACCAGTACTCAAACCTTACTAAACATCAGAGA
ATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTTGCAAAGCCTTCACCTGGTACACATCCCTTACTATACATCA
GAGAATTCACACTGGAGAGAAACCATACAAATGTAAAGAATGCAGCATCTTCAACCAGTACTCATATCTTACTATACATC
AGAGAATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCCTTTAACAACTGCTCAAATCTTACTCAA
CATTGGAGAGTTCATACTGGAGGGAAACCTTACAAATGTAAAGAATGCGGCAAAGCCTTCAAGCAGTACTCATGCCTTAC
TCGACATCAGAGAATTCATACTGGAGAGAAACCATACAAATGTATAGAATGTGGCAAGGCTTTTAACCAGTGTTCAAACC
TCACACAACATCAGAGACTTCAT
CAGGTGCTGTTGACTTTCAGGGACGTGGCCATAGAGTTCTCGCCAGAGGAGTGGGAATGCCTGGACCCCGCTCAGAGGGC
CTTGTACAGGGACGTGATGCTGGAGAACTACAGGAACCTGCTCTCCCTGGCAGCAGTTTCCCCAAAACCTTACTTAAGAA
CATGTGGCCAGAACCTGCAGGCCCAGGTTCAAATCTTGGCTCTCAAATTTACTTTCTGTGTGAATTATGAAAAGCCTTAC
AAATGCAATGCTTGTGAGAAGGCTTTTAGAGAAAGCTCAAACCTTGCTAGTCACCAGAGAATTCTTTCTGGGCAGAGACC
TTACAAATGTAATGAGTGTGGCAAAGCATTTACCCAATTTGCAAACCTTTCTAGACATCTGAGACTCCATACCAGAGAGA
AACCATATAAATGTGATATATGTGGCAAGGGCTGTAGTCAAAATGCAAATCTTGCAAGTCATCAGAAAATCCATACTGGG
GAGAGACCTTACAAATGTAATGAGTGTGGCAAAGCCTTGTCCGAGCGTTCAAGCCTTACTCAGCATAAGAGAATCCATAC
TGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTTGAATCTCACTAATCATCAGAGAATTC
ATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAACCGCATCTCACACCTCACTAGACACCAGAGA
ATCCATACTGGAGAGAAACCTTATAAATGTAACATGTGTGGCAAGGTCTGTAGTCAACATTCAAATCTTCTAAGTCATCA
GAGAATTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGGAAGACTTTCAGAGGAAGCTCGAATCTCACTAATC
ATCAGAGAATTCATTCTGGGCAGAGGCCTTACAAATGTAGTGAGTGTGACAAATCCTTCAGCCGCATCTCACACCTCACT
AGACACCAGAGAATCCATACTGGAGAGAAACCTTATAAATGTAACGTGTGTGGCAAGGTCTGTAGTCAACATTCAAATCT
TACAATTCATCAGAGAACTCATACAGGAGAGAAACCTTATAAATGTAATGAGTGTGGCAAAGCCTTTATGGAGCGTTCAA
GCCTTACTCAACATACGAGAATCCATAGTGGAGAGAAGCCTTACTCGTGTAAAGAATGTGGCAAAGCCTTTAACCAGTCC
TCTAACCTTGTCATACATCAAATAATTCATACTGGAGAGAAGCCATACAAATGCAATGTGTGTGGCAAAGCCTTTAATGT
GTGTTCAAGCCTTACCCGTCATCAGACAATCCATACTGGGGAGAAGCCTTACAAATGTACTGTATGTCACCAGGTTTTTA
TGCATCCTGCATTGCTCACAGAACACCAGAAAACACGCGTTAGAGAAAAACCTTACAAGTGTAACGAGTGTGGGAAGGCT
TTTAGCCACTGCTCAACCTTAGCTAATCACCAAAGAATTCATTCTGATGAGAGACCTTACAAATGTAATGAGTGTGGCAG
AGCCTTTAACAGGTTCTCAAACCTCACAAGGCATCAGAGAATTCATACTGGGGAGAAACCATATAAATGTAATGTGTGTG
GTAAGGATTTTATGATACGTTCACACCTTTGGAGTCATGAGCGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAG
TGTGGCAAAGCCTTTTCTGAGCGTTCAAATCTTGCTCAACACAAGAGAATCCATACTGGAGAGAAACCTTACAAATGTAA
CGAATGTGGTAAGGATTTTACCACACGTTCACACCTTTGGGGTCATGAGAGGATTCATACTGGAGAGAAGCCTTACAAAT
GTAATGAGTGTGGCAAAGCCTTCACCGGGAGTTCAAATCTTACTCAACATAAGAAAATTCATACTGGAGAGAAACCATAT
AAATGTACTGTATGTGGCAAGGCCTTTAGTCAGAATTCAAGCCTTATAGTTCATCAAAGAATTCATACTGGGGAGAAGCC
TTACAAATGTCATGAATGTGGCAAAGCCTTTAAGCAGTACTCGAGCCTCAATAGACACCAGAATATACATGGAGGAGAAC
AACCAAACACATGTAATCACTGTGGGAAAGCCTTTCATCAATCATCAACTCTAAAAAGACGTACGAAAATCCATACTGAA
GAGAGACCATACAAATGTAAAGAATGTGGGAAAGCCTTCAACCGGTACTCAAACTTCACTATACATCAGAGAATTCATAC
TGGAGAGAAACCTTACAAATGTAAAGAATGTGGCCAAGCCTTCACCTGGTGCTCATCCCTTACTATACATCAGAGAATTC
ACACTGGAGAGAAGCCTTACAAATGTAAAGTATGTTGCAAAGCCTTCAACCAGTACTCAAACCTTACTAAACATCAGAGA
ATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTTGCAAAGCCTTCACCTGGTACACATCCCTTACTATACATCA
GAGAATTCACACTGGAGAGAAACCATACAAATGTAAAGAATGCAGCATCTTCAACCAGTACTCATATCTTACTATACATC
AGAGAATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCCTTTAACAACTGCTCAAATCTTACTCAA
CATTGGAGAGTTCATACTGGAGGGAAACCTTACAAATGTAAAGAATGCGGCAAAGCCTTCAAGCAGTACTCATGCCTTAC
TCGACATCAGAGAATTCATACTGGAGAGAAACCATACAAATGTATAGAATGTGGCAAGGCTTTTAACCAGTGTTCAAACC
TCACACAACATCAGAGACTTCAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 2 .33 RPM |
| SRP021940_embryo | 4 .58 RPM |
| SRP021940_cerebellum | 1 .87 RPM |
| SRP021940_testis | 1 .92 RPM |
| SRP021940_placental_villous | 1 .68 RPM |
| SRP021940_articular_cartilage | 2 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000003688 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005643 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029638 | possible_ortholog | 2 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000004688 | possible_ortholog | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000008115 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_61 | 65.12 | 56.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023794 retrocopies