Parental gene:

CSNK2A2, ENSEEUG00000000930

Aliases:None
Description:casein kinase 2, alpha prime polypeptide [Source:HGNC Symbol;Acc:2459]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_678:4927..64497(-)


>ENSEEUG00000000930
AATCAAGATGATTACCAACTGGTTCGAAAACTTGGTCGGGGAAAATACAGTGAAGTATTTGAGGCCATCAACATCACCAA
CAATGAGAGAGTGGTTGTAAAAATCCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCAACTCTACCAGATCCTGACGGACTTCGATATCCGGTTTTATATGTATGAACTACT
TAAAGCTCTGGATTACTGCCACAGCAAGGGGATCATGCACAGGGATGTGAAACCTCACAATGTCATGATAGATCACCAAC
AGAAAAAGCTGCGACTGATAGACTGGGGTCTGGCAGAGTTCTATCATCCTGCTCAGGAGTACAATGTCCGAGTAGCCTCA
AGGTACTTCAAGGGACCAGAGCTCCTTGTGGACTATCAGATGTATGATTATAGCTTGGACATGTGGAGTTTAGGTTGTAT
GTTAGCAAGCATGATTTTTCGAAAGGAACCCTTCTTCCATGGACAGGACAACTATGACCAGCTTGTTCGCATTGCCAAGG
TTCTGGGTACAGATGAGCTGTATGGGTATCTGAAGAAGTATCACATAGACCTAGATCCACACTTCAATGATATCCTGGGA
CAACATTCACGGAAACGCTGGGAAAACTTTATCCATAGTGAGAACAGACATCTTGTCAGCCCTGAGGCCCTAGATCTTCT
GGACAAACTTCTGCGGTATGACCATCAACAGAGACTGACTGCCAAAGAGGCCATGGAACACCCATACTTTTACCCTGTAG
TGAAGGAGCAGTCCCAGCCCTGTGCAGATAATGCTGTGCTTTCCAGTGGTCTCACGGCAGCCCGATGA

Library Parental gene expression (RPM)
SRP017611_brain 40 .12 RPM
SRP017611_kidney 30 .19 RPM
SRP017611_liver 20 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000013416 ortholog_one2one 1 retrogene
retro_meug_1470,
Myotis lucifugus ENSMLUG00000000283 ortholog_one2one 2 retrogenes
retro_mluc_1999, retro_mluc_2562,
Mustela putorius furo ENSMPUG00000004713 ortholog_one2one 1 retrogene
retro_mputfur_1121,
Ochotona princeps ENSOPRG00000011847 ortholog_one2one 2 retrogenes
retro_opri_149, retro_opri_723,
Ictidomys tridecemlineatus ENSSTOG00000003538 ortholog_one2one 1 retrogene
retro_itri_1769,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_442 79.89 56.83
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Download FASTA sequences of all ENSEEUG00000000930 retrocopies