Parental gene: | CSNK2A2, ENSEEUG00000000930 |
| Aliases: | None |
| Description: | casein kinase 2, alpha prime polypeptide [Source:HGNC Symbol;Acc:2459] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_678:4927..64497(-) |
>ENSEEUG00000000930
AATCAAGATGATTACCAACTGGTTCGAAAACTTGGTCGGGGAAAATACAGTGAAGTATTTGAGGCCATCAACATCACCAA
CAATGAGAGAGTGGTTGTAAAAATCCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCAACTCTACCAGATCCTGACGGACTTCGATATCCGGTTTTATATGTATGAACTACT
TAAAGCTCTGGATTACTGCCACAGCAAGGGGATCATGCACAGGGATGTGAAACCTCACAATGTCATGATAGATCACCAAC
AGAAAAAGCTGCGACTGATAGACTGGGGTCTGGCAGAGTTCTATCATCCTGCTCAGGAGTACAATGTCCGAGTAGCCTCA
AGGTACTTCAAGGGACCAGAGCTCCTTGTGGACTATCAGATGTATGATTATAGCTTGGACATGTGGAGTTTAGGTTGTAT
GTTAGCAAGCATGATTTTTCGAAAGGAACCCTTCTTCCATGGACAGGACAACTATGACCAGCTTGTTCGCATTGCCAAGG
TTCTGGGTACAGATGAGCTGTATGGGTATCTGAAGAAGTATCACATAGACCTAGATCCACACTTCAATGATATCCTGGGA
CAACATTCACGGAAACGCTGGGAAAACTTTATCCATAGTGAGAACAGACATCTTGTCAGCCCTGAGGCCCTAGATCTTCT
GGACAAACTTCTGCGGTATGACCATCAACAGAGACTGACTGCCAAAGAGGCCATGGAACACCCATACTTTTACCCTGTAG
TGAAGGAGCAGTCCCAGCCCTGTGCAGATAATGCTGTGCTTTCCAGTGGTCTCACGGCAGCCCGATGA
AATCAAGATGATTACCAACTGGTTCGAAAACTTGGTCGGGGAAAATACAGTGAAGTATTTGAGGCCATCAACATCACCAA
CAATGAGAGAGTGGTTGTAAAAATCCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCAACTCTACCAGATCCTGACGGACTTCGATATCCGGTTTTATATGTATGAACTACT
TAAAGCTCTGGATTACTGCCACAGCAAGGGGATCATGCACAGGGATGTGAAACCTCACAATGTCATGATAGATCACCAAC
AGAAAAAGCTGCGACTGATAGACTGGGGTCTGGCAGAGTTCTATCATCCTGCTCAGGAGTACAATGTCCGAGTAGCCTCA
AGGTACTTCAAGGGACCAGAGCTCCTTGTGGACTATCAGATGTATGATTATAGCTTGGACATGTGGAGTTTAGGTTGTAT
GTTAGCAAGCATGATTTTTCGAAAGGAACCCTTCTTCCATGGACAGGACAACTATGACCAGCTTGTTCGCATTGCCAAGG
TTCTGGGTACAGATGAGCTGTATGGGTATCTGAAGAAGTATCACATAGACCTAGATCCACACTTCAATGATATCCTGGGA
CAACATTCACGGAAACGCTGGGAAAACTTTATCCATAGTGAGAACAGACATCTTGTCAGCCCTGAGGCCCTAGATCTTCT
GGACAAACTTCTGCGGTATGACCATCAACAGAGACTGACTGCCAAAGAGGCCATGGAACACCCATACTTTTACCCTGTAG
TGAAGGAGCAGTCCCAGCCCTGTGCAGATAATGCTGTGCTTTCCAGTGGTCTCACGGCAGCCCGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 20 .90 RPM |
| SRP017611_kidney | 30 .19 RPM |
| SRP017611_brain | 40 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000013416 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000283 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000004713 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000011847 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000003538 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_442 | 79.89 | 56.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000000930 retrocopies