Parental gene: | RPS10, ENSEEUG00000003376 |
| Aliases: | None |
| Description: | ribosomal protein S10 [Source:HGNC Symbol;Acc:10383] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | scaffold_311633:4386..9598(+) |
>ENSEEUG00000003376
ATGTTGATGCCCAAGAAGAACCGGATTGCCATTTACGAACTCCTTTTTAAGGAGGGAGTGATGGTGGCTAAGAAGGACGT
CCACATGCCCAAACACCCCGAGCTCGCAGACAAGAACGTCCCCAACCTTCACGTCATGAAGGCCATGCAGTCTCTCAAGT
CACGAGGCTACGTGAAGGAACAGTTTGCCTGGAGGCATTTTTACTGGTATCTTACCAACGAGGGTATCCAGTACCTCCGA
GATTACCTCCACCTGCCCCCTGAGATTGTGCCCGCCACCCTGCGTCGCAGCCGGCCTGAGACTGGCAGGCCGAGGCCCAA
AGGTCTGGAAGGTGAGCGACCTGCAAGATTCACACGAGGGGAGGCTGACAGAGATACTTACAGAAGAAGTGCTGTGCCCC
CTGGTGCCGACAAGAAAGCTGAGGCTGGTGCTGGGTCAGCAACCGAATTCCAGTTT
ATGTTGATGCCCAAGAAGAACCGGATTGCCATTTACGAACTCCTTTTTAAGGAGGGAGTGATGGTGGCTAAGAAGGACGT
CCACATGCCCAAACACCCCGAGCTCGCAGACAAGAACGTCCCCAACCTTCACGTCATGAAGGCCATGCAGTCTCTCAAGT
CACGAGGCTACGTGAAGGAACAGTTTGCCTGGAGGCATTTTTACTGGTATCTTACCAACGAGGGTATCCAGTACCTCCGA
GATTACCTCCACCTGCCCCCTGAGATTGTGCCCGCCACCCTGCGTCGCAGCCGGCCTGAGACTGGCAGGCCGAGGCCCAA
AGGTCTGGAAGGTGAGCGACCTGCAAGATTCACACGAGGGGAGGCTGACAGAGATACTTACAGAAGAAGTGCTGTGCCCC
CTGGTGCCGACAAGAAAGCTGAGGCTGGTGCTGGGTCAGCAACCGAATTCCAGTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 69 .29 RPM |
| SRP017611_kidney | 97 .52 RPM |
| SRP017611_brain | 34 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Latimeria chalumnae | ENSLACG00000017219 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008539 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013929 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016516 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000000731 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_367 | 66.23 | 50.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_647 | 95.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000003376 retrocopies