Parental gene: | TCEB1, ENSEEUG00000005157 |
| Aliases: | None |
| Description: | transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:HGNC Symbol;Acc:11617] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_5440:2231..11246(-) |
>ENSEEUG00000005157
GGAGATAAGACCTATGGTGGCTGTGAAGGCCCCGACGCCATGTATGTCAAACTGATATCGTCGAATGGCCATGAATTTAT
CGTAAAAAGAGAACATGCGTTAACATCGGGAACGATAACAGCCATGTTAAGTGGCCCGGNTCAGTTTGCTGAAAATGAAA
CCAATGAAGTCAATTTTAGAGAGATCCCTTCACATGTGCTATCAAAAGTATGCATGTATTTTACCTACAAGGTTCGCTAC
ACTAACAGTTCTACCGAGATTCCTGAATTCCCAATTGCACCGGAAATTGCACTGGAACTGCTGATGGCTGCGAACTTCCT
AGATTGTTAA
GGAGATAAGACCTATGGTGGCTGTGAAGGCCCCGACGCCATGTATGTCAAACTGATATCGTCGAATGGCCATGAATTTAT
CGTAAAAAGAGAACATGCGTTAACATCGGGAACGATAACAGCCATGTTAAGTGGCCCGGNTCAGTTTGCTGAAAATGAAA
CCAATGAAGTCAATTTTAGAGAGATCCCTTCACATGTGCTATCAAAAGTATGCATGTATTTTACCTACAAGGTTCGCTAC
ACTAACAGTTCTACCGAGATTCCTGAATTCCCAATTGCACCGGAAATTGCACTGGAACTGCTGATGGCTGCGAACTTCCT
AGATTGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .61 RPM |
| SRP017611_kidney | 2 .06 RPM |
| SRP017611_brain | 2 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000015988 | possible_ortholog | 11 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_181 | 96.26 | 98.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_271 | 59.14 | 84.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_556 | 81.65 | 98.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000005157 retrocopies