Parental gene:

PTGR1, ENSETEG00000006136

Aliases:None
Description:prostaglandin reductase 1 [Source:HGNC Symbol;Acc:18429]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_1902:3217..134739(-)


>ENSETEG00000006136
ATGGTGCGTGCTAAGACTTGGATCCTGAAGAAGCATTTTGAAGGCTACCCGACTCATAGTAACTTTGAGTTGAAGACAAC
GGAACTCCCAGCCTTAAAAAATGGAGAGCTCCTGCTGGAAGCTTTGTTCCTCACTGTGGATCCTTATATGAGAGTGGCAG
CCAAAAAGATGAAAGAGGGTGAGAAGATGATGGGCCAGCAAGTAGCCAGAGTTGTGGAAAGTAAAAACTCAGCCTTCCCC
GTGGGAACCACTGTGGTGGCTTCTTCTGGTTGGACAACACACTGCATTTCTGACGGGACAGGCCTGGAAACGCTGCCTGC
AGAATGGCCGGACACTTTACCCCTGTCTTTGGCTCTAGGGGCAGTCGGCATGACAGGCCTCACAGCGTACTTTGGCCTGC
TTGACATCTGTGGTGTGAAAGGAGGAGAAACCGTGATGGTCAATGCAGCTGCAGGAGCAGTGGGTGCTGTTGTGGGGCAG
ATAGCTAAGCTCAAGGGCTGCACAGTGGTTGGAGCAGCAGGGTCTGATGACAAAGTGGCCTACATTAAAAAACTCGGATT
CGACGTTGCCTTTAACTACAAGACCATAGCGTCTTTGGAAGAAACTTTGAAAAAAGCCTCTCCTGATGGTTATGATTGCT
ATTTTGATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCACCCGCCGAGATTGTCATCTATCAGGAACTCCGCAT
GGAAGGGTTCATCGTCTCCCGCTGGCAAGGAGCTGTACGCCAGAAAGCTTTGAAAGACTTGCTGACTTGGGTCTCAGAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003000 ortholog_one2one 2 retrogenes
retro_cfam_1290, retro_cfam_1876,
Callithrix jacchus ENSCJAG00000017571 ortholog_one2one 1 retrogene
retro_cjac_1653,
Echinops telfairi ENSETEG00000005782 within_species_paralog 1 retrogene
retro_etel_216,
Felis catus ENSFCAG00000004339 ortholog_one2one 1 retrogene
retro_fcat_1898,
Homo sapiens ENSG00000106853 ortholog_one2one 1 retrogene
retro_hsap_219,
Nomascus leucogenys ENSNLEG00000017487 ortholog_one2one 1 retrogene
retro_nleu_2424,
Otolemur garnettii ENSOGAG00000011144 ortholog_one2one 1 retrogene
retro_ogar_2834,
Pongo abelii ENSPPYG00000019499 ortholog_one2one 1 retrogene
retro_pabe_283,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_358 84.66 63.48
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Download FASTA sequences of all ENSETEG00000006136 retrocopies