Parental gene:

PFDN1, ENSFCAG00000001272

Aliases:None
Description:prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866]
Organism:Cat (Felis catus)
Coordinates:A1:116965786..117037335(-)


>ENSFCAG00000001272
ATGGCCGCTCCCGTGGATCTGGAATTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGACACTCAACAGAAGGT
GAAGCTTGCAGACATACAGATTGAACAGCTAAACAGGACGAAAAAGCATGCACATCTTACAGATACAGAGATTATGACTT
TGATAGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTTCAGTCCAAGGAGGTAATTCATAATCAACTG
TTAGAGAAACAGAAAATAGCAGAAGAAAAAATTAAAGAATTGGAACAGAAAAAATCCTACCTGGAGCGGAGTGTGAAGGA
AGCTGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCACAG

Library Parental gene expression (RPM)
SRP017611_brain 19 .86 RPM
SRP017611_kidney 21 .85 RPM
SRP017611_liver 11 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 possible_ortholog 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Equus caballus ENSECAG00000011843 ortholog_one2one 1 retrogene
retro_ecab_53,
Echinops telfairi ENSETEG00000019281 ortholog_one2one 1 retrogene
retro_etel_1629,
Macropus eugenii ENSMEUG00000002726 ortholog_one2one 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Microcebus murinus ENSMICG00000000349 ortholog_one2one 1 retrogene
retro_mmur_1121,
Oryctolagus cuniculus ENSOCUG00000009432 ortholog_one2one 4 retrogenes
retro_ocun_1049, retro_ocun_1885, retro_ocun_804, retro_ocun_999,
Otolemur garnettii ENSOGAG00000003376 ortholog_one2one 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,
Rattus norvegicus ENSRNOG00000018653 ortholog_one2one 1 retrogene
retro_rnor_985,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1323 53.01 66.39
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Download FASTA sequences of all ENSFCAG00000001272 retrocopies