Parental gene: | CENPN, ENSFCAG00000004978 |
| Aliases: | None |
| Description: | centromere protein N [Source:HGNC Symbol;Acc:30873] |
| Organism: | Cat (Felis catus) |
| Coordinates: | E2:56716784..56739401(+) |
>ENSFCAG00000004978
ATGGATGAAACTGTTGCCGAGTTTATCAAGAGGACCATCTTGAAAATCCCAATGACTGAAATGATGACAATCCTCAAAGC
CTGGGATTTTTTGCCTGAAAATCAACTGCAGACAGTAAACTTCCGGCAGAGAAAGGAATCTCTCGTTCAGGACTTGGTTC
TGCTCTGTGAGAGTAAGCGTGCAAGTCTCCGTGACGCAGCCCTTTTAGACATCATTTATACTCAATTTCATCAGCACCAG
AAAGTTTGGGATGTTTTTCAAATGAGTAAAGAACCAGGTGAAGACGTTGACCTTTTTGATATGGAACGATTCAAAAGTTC
ATTTGAGAAAATTCTTCGGAGAGCATTAAAAAATGTGACGGTCAGCTTCAGAGACGCTGAGGAGAATGCAGTATGGATTC
GAATCGCCTGGGGAACACAGTACAGAAAGCCCAACCAGTACAAACCGGTTTATGTGGTGTATTATTCCCAGACTCCCTAC
GCCTTCACTTCCTTCTGCCACCTGAAGAGCAATACACCCCTTCTGAGTCAGGCGCTGACAGTTGCTAGCAATCACCATAA
GATTGTGAAAATGGACCTCAGAAGCCGGTATCTGGACTCTCTGAAGGCTATTGTTTTCAAACAGTATAATCAGAAGTTTG
AAACTCACAACTCCACTATGCCTCTACAAGAAACCCTTGAGCTGGACATGCACAGTATAGTGGATTCAAGGATCATTCAT
GAAAACAAAATTGAAAAAGAGAGAGTCCAGAGAGTGACTCAAGAAACTTTTGGAGACTATCCTCAACCAAGACTAGAATT
TGCACAATATAAGCTTGAAACGAAATTCAGAAGTGACTTCCATGGAGGCATCTTGGCTGAGAGAAAAGAGCCCCTCCGGT
GCCTAATAAAGTTCTCTAGCCCGCATCTTCTGGAAGCGTTGAAATCCTTAGCACCAGCTGGTATTGCAGACGCACCACTT
TCTCCGTTGCTCACTTGCATACCCAACAAGGGAATGAATTATTTTAAAATTAGAGACAAATAG
ATGGATGAAACTGTTGCCGAGTTTATCAAGAGGACCATCTTGAAAATCCCAATGACTGAAATGATGACAATCCTCAAAGC
CTGGGATTTTTTGCCTGAAAATCAACTGCAGACAGTAAACTTCCGGCAGAGAAAGGAATCTCTCGTTCAGGACTTGGTTC
TGCTCTGTGAGAGTAAGCGTGCAAGTCTCCGTGACGCAGCCCTTTTAGACATCATTTATACTCAATTTCATCAGCACCAG
AAAGTTTGGGATGTTTTTCAAATGAGTAAAGAACCAGGTGAAGACGTTGACCTTTTTGATATGGAACGATTCAAAAGTTC
ATTTGAGAAAATTCTTCGGAGAGCATTAAAAAATGTGACGGTCAGCTTCAGAGACGCTGAGGAGAATGCAGTATGGATTC
GAATCGCCTGGGGAACACAGTACAGAAAGCCCAACCAGTACAAACCGGTTTATGTGGTGTATTATTCCCAGACTCCCTAC
GCCTTCACTTCCTTCTGCCACCTGAAGAGCAATACACCCCTTCTGAGTCAGGCGCTGACAGTTGCTAGCAATCACCATAA
GATTGTGAAAATGGACCTCAGAAGCCGGTATCTGGACTCTCTGAAGGCTATTGTTTTCAAACAGTATAATCAGAAGTTTG
AAACTCACAACTCCACTATGCCTCTACAAGAAACCCTTGAGCTGGACATGCACAGTATAGTGGATTCAAGGATCATTCAT
GAAAACAAAATTGAAAAAGAGAGAGTCCAGAGAGTGACTCAAGAAACTTTTGGAGACTATCCTCAACCAAGACTAGAATT
TGCACAATATAAGCTTGAAACGAAATTCAGAAGTGACTTCCATGGAGGCATCTTGGCTGAGAGAAAAGAGCCCCTCCGGT
GCCTAATAAAGTTCTCTAGCCCGCATCTTCTGGAAGCGTTGAAATCCTTAGCACCAGCTGGTATTGCAGACGCACCACTT
TCTCCGTTGCTCACTTGCATACCCAACAAGGGAATGAATTATTTTAAAATTAGAGACAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .46 RPM |
| SRP017611_kidney | 7 .21 RPM |
| SRP017611_brain | 1 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011635 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000166451 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000024 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002111 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007345 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000039 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1852 | 84.21 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000004978 retrocopies