Parental gene:

COPS8, ENSFCAG00000013789

Aliases:None
Description:COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:24335]
Organism:Cat (Felis catus)
Coordinates:C1:217750196..217762677(+)


>ENSFCAG00000013789
CCTCCCCGGGTGGTGGGAGGCGAGGGAGTGTGGATTTCATTAAAGACATTTGTGAGCAAGCGTACACAGACCAAAGAAGA
AGCTCCTGGAGGAATTGCTACACCCCCAGTGTATGGTCAGCTCTTGGCTTTATATCTGCTCCATAATGACATGAATAATG
CAAGATATCTTTGGAAAAGGATACCACCTGCTATAAAATCGGCGAACTCTGAACTTGGGGGAATTTGGTCAGTAGGACAG
AGAATCTGGCAGAGAGATTTCCCTGGGATCTATTCGACCATCAACGCACACCAGTGGTCTGAGACAGTCCAGCCGATCAT
GGAAGCACTTAGAGATGCCACACGGAGAAGAGCCTTCGCCCTGGTCTCTCAAGCCTACACCTCCATCATCGCCGACGACT
TTGCAGCCTTTGTGGGGCTCCCGGTGGAAGAGGCCGTGAAAGGTATATTAGAACAAGGATGGCAAGCCGACTCCACCACA
AGGATGGTTATGCCCAAAAAGCCAGTTGCAGGGGCCCTGGATGTTTCCTTCAACCGGTTTATTCCCCTATCAGCATGCGC
AGAGCCCGCCCCAGTCCCGCCCATCCCCAACGAGCAGCAGTTAGCCAGACTGACCGACTACGTGGCTTTCCTCGAAAACT
GA

Library Parental gene expression (RPM)
SRP017611_brain 16 .53 RPM
SRP017611_kidney 10 .10 RPM
SRP017611_liver 5 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005854 ortholog_one2one 3 retrogenes
retro_btau_1315, retro_btau_1401, retro_btau_1402,
Canis familiaris ENSCAFG00000030168 ortholog_one2many 1 retrogene
retro_cfam_1327,
Dasypus novemcinctus ENSDNOG00000015309 possible_ortholog 5 retrogenes
retro_dnov_1157, retro_dnov_1306, retro_dnov_149, retro_dnov_1701, retro_dnov_527,
Loxodonta africana ENSLAFG00000008617 ortholog_one2one 1 retrogene
retro_lafr_928,
Macropus eugenii ENSMEUG00000008189 ortholog_one2many 3 retrogenes
retro_meug_583, retro_meug_609, retro_meug_701,
Monodelphis domestica ENSMODG00000007474 ortholog_one2one 1 retrogene
retro_mdom_1295,
Mustela putorius furo ENSMPUG00000000068 ortholog_one2many 1 retrogene
retro_mputfur_176,
Mus musculus ENSMUSG00000034432 ortholog_one2one 1 retrogene
retro_mmus_1812,
Oryctolagus cuniculus ENSOCUG00000007341 ortholog_one2one 4 retrogenes
retro_ocun_1549, retro_ocun_1579, retro_ocun_428, retro_ocun_550,
Pongo abelii ENSPPYG00000013308 possible_ortholog 1 retrogene
retro_pabe_3787,
Rattus norvegicus ENSRNOG00000019635 ortholog_one2one 3 retrogenes
retro_rnor_1005, retro_rnor_1078, retro_rnor_975,
Tupaia belangeri ENSTBEG00000015944 ortholog_one2one 1 retrogene
retro_tbel_4315,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1648 77.78 69.95
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Download FASTA sequences of all ENSFCAG00000013789 retrocopies