Parental gene:

CBLL1, ENSG00000105879

Aliases:CBLL1, HAKAI, RNF188
Description:Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21225]
Organism:Human (Homo sapiens)
Coordinates:7:107384141..107400131(+)


>ENSG00000105879
ATGGATCACACTGACAATGAGTTACAAGGCACTAATAGTTCTGGATCCTTGGGTGGTCTTGATGTTCGCAGACGAATTCC
TATAAAGCTCATCTCCAAACAAGCAAACAAAGCGAAACCTGCACCGCGAACTCAAAGAACTATAAACAGGATGCCTGCAA
AGGCTCCACCTGGTGATGAAGAAGGATTTGATTATAATGAAGAAGAACGGTATGACTGTAAAGGGGGTGAGCTGTTTGCA
AATCAGCGAAGATTTCCTGGACACCTTTTTTGGGACTTTCAGATAAACATCTTAGGTGAAAAGGATGATACACCAGTTCA
TTTCTGTGACAAGTGTGGATTGCCTATTAAAATCTATGGGAGAATGATTCCATGCAAGCATGTTTTTTGCTATGACTGTG
CTATTTTACATGAAAAAAAGGGAGATAAGATGTGTCCAGGCTGTAGTGATCCTGTGCAGCGAATTGAGCAGTGTACACGA
GGTTCTCTCTTCATGTGTAGCATTGTTCAAGGGTGCAAGAGAACATATTTGTCTCAGAGAGACTTACAGGCTCATATCAA
CCATCGCCATATGAGAGCTGGAAAACCTGTTACCCGTGCTTCACTTGAAAATGTTCATCCTCCTATTGCCCCACCACCAA
CTGAAATCCCTGAGCGTTTTATAATGCCACCAGACAAGCACCATATGAGCCATATTCCGCCAAAGCAGCACATCATGATG
CCACCACCTCCTTTGCAACATGTGCCACATGAGCACTATAATCAGCCACATGAGGATATTCGTGCTCCTCCAGCAGAATT
GTCCATGGCTCCACCTCCACCTCGATCGGTCAGTCAGGAAACCTTTCGTATTTCAACAAGAAAACACAGCAATTTAATAA
CCGTCCCTATTCAGGATGACTCAAATTCAGGTGCTAGAGAACCACCACCTCCTGCCCCAGCACCTGCTCACCATCATCCT
GAATATCAGGGTCAACCAGTGGTATCGCACCCTCATCATATTATGCCTCCACAGCAACATTATGCACCACCCCCACCTCC
TCCACCACCAATAAGCCATCCAATGCCACATCCTCCCCAGGCTGCAGGTACTCCTCACTTGGTATATAGCCAAGCTCCAC
CTCCACCAATGACCTCTGCTCCACCACCAATAACCCCTCCCCCTGGACATATTATTGCCCAGATGCCACCTTATATGAAT
CATCCTCCTCCAGGACCTCCCCCACCTCAACATGGTGGTCCACCTGTAACTGCACCCCCTCCTCACCATTATAATCCTAA
CTCATTACCCCAGTTCACTGAAGATCAAGGAACTCTGAGCCCTCCATTTACACAACCAGGGGGAATGAGTCCTGGTATAT
GGCCTGCACCAAGAGGGCCACCACCACCTCCACGATTGCAGGGTCCGCCTTCTCAAACCCCACTTCCTGGACCACATCAT
CCAGATCAGACAAGATATAGACCGTATTACCAATGA

Library Parental gene expression (RPM)
bodymap2_adipose 17 .75 RPM
bodymap2_adrenal 18 .75 RPM
bodymap2_brain 17 .32 RPM
bodymap2_breast 15 .06 RPM
bodymap2_colon 15 .84 RPM
bodymap2_heart 18 .00 RPM
bodymap2_kidney 13 .01 RPM
bodymap2_liver 7 .61 RPM
bodymap2_lung 11 .90 RPM
bodymap2_lymph_node 16 .81 RPM
bodymap2_ovary 28 .14 RPM
bodymap2_prostate 19 .29 RPM
bodymap2_skeletal_muscle 30 .19 RPM
bodymap2_testis 29 .47 RPM
bodymap2_thyroid 20 .92 RPM
bodymap2_white_blood_cells 62 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016379 ortholog_one2one 1 retrogene
retro_cjac_4046,
Gorilla gorilla ENSGGOG00000004921 ortholog_one2one 1 retrogene
retro_ggor_164,
Microcebus murinus ENSMICG00000012936 ortholog_one2one 1 retrogene
retro_mmur_1635,
Nomascus leucogenys ENSNLEG00000008660 ortholog_one2one 1 retrogene
retro_nleu_19,
Pongo abelii ENSPPYG00000017904 ortholog_one2one 1 retrogene
retro_pabe_112,
Pan troglodytes ENSPTRG00000019583 ortholog_one2one 1 retrogene
retro_ptro_67,
Rattus norvegicus ENSRNOG00000007253 ortholog_one2one 1 retrogene
retro_rnor_1063,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_49 52.23 58.98
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Download FASTA sequences of all ENSG00000105879 retrocopies