Parental gene:

DSE, ENSG00000111817

Aliases:DSE, DSEP, DSEPI, EDSMC2, SART-2, SART2
Description:dermatan sulfate epimerase [Source:HGNC Symbol;Acc:21144]
Organism:Human (Homo sapiens)
Coordinates:6:116575335..116762424(+)


>ENSG00000111817
ATGAGGACTCACACACGGGGGGCTCCCAGTGTGTTTTTCATATATTTGCTTTGCTTTGTGTCAGCCTACATCACCGACGA
GAACCCAGAAGTTATGATTCCCTTCACCAATGCCAACTACGACAGCCATCCCATGCTGTACTTCTCCAGGGCAGAAGTGG
CGGAGCTGCAGCTCAGGGCTGCCAGCTCGCACGAGCACATTGCAGCCCGCCTCACGGAGGCTGTGCACACGATGCTGTCC
AGCCCCTTGGAATACCTCCCTCCCTGGGATCCCAAGGACTACAGTGCCCGCTGGAATGAAATTTTTGGAAACAACTTGGG
TGCCTTGGCAATGTTCTGTGTGCTGTATCCTGAGAACATTGAAGCCCGAGACATGGCCAAAGACTACATGGAGAGGATGG
CAGCGCAGCCTAGTTGGTTGGTGAAAGATGCTCCTTGGGATGAGGTCCCGCTTGCTCACTCCCTGGTTGGTTTTGCCACT
GCTTATGACTTCTTGTACAACTACCTGAGCAAGACACAACAGGAGAAGTTTCTTGAAGTGATTGCCAATGCCTCAGGGTA
TATGTATGAAACTTCATACAGGAGAGGATGGGGATTTCAATACCTGCACAATCATCAGCCCACCAACTGTATGGCTTTGC
TCACGGGAAGCCTAGTCCTGATGAATCAAGGATATCTTCAAGAAGCCTACTTATGGACCAAACAAGTTCTGACCATCATG
GAGAAATCTCTGGTCTTGCTCAGGGAGGTGACGGATGGCTCCCTCTATGAAGGAGTTGCGTATGGCAGCTACACCACTAG
ATCACTCTTCCAATACATGTTTCTCGTCCAGAGGCACTTCAACATCAACCACTTTGGCCATCCGTGGCTTAAACAACACT
TTGCATTTATGTATAGAACCATCCTGCCAGGGTTTCAAAGGACTGTGGCTATTGCGGACTCAAATTACAACTGGTTTTAT
GGTCCAGAAAGCCAATTAGTGTTCCTTGATAAATTTGTCATGCGTAATGGCAGTGGTAACTGGCTAGCTGACCAAATCAG
AAGGAACCGTGTGGTGGAAGGTCCAGGAACACCATCCAAAGGGCAGCGCTGGTGCACTCTGCACACAGAATTTCTCTGGT
ATGATGGCAGCTTGAAATCGGTTCCTCCTCCAGACTTTGGCACCCCTACACTGCATTATTTTGAAGACTGGGGTGTCGTG
ACTTATGGAAGTGCACTACCTGCAGAAATCAATAGATCTTTCCTTTCCTTCAAGTCTGGAAAACTGGGGGGACGTGCAAT
ATATGACATTGTCCACAGAAACAAATACAAAGATTGGATCAAAGGATGGAGAAATTTTAATGCAGGGCATGAACATCCTG
ATCAAAACTCATTTACTTTTGCTCCCAATGGTGTGCCTTTCATTACTGAGGCTCTGTACGGGCCAAAGTACACCTTCTTC
AACAATGTTTTGATGTTTTCCCCAGCTGTGTCAAAGAGCTGCTTTTCTCCCTGGGTGGGTCAGGTCACAGAAGACTGCTC
ATCAAAATGGTCTAAATACAAGCATGACCTGGCAGCTAGTTGTCAGGGGAGGGTGGTTGCAGCAGAGGAGAAAAATGGGG
TGGTTTTCATCCGAGGAGAAGGTGTGGGAGCTTATAACCCCCAGCTCAACCTGAAGAATGTTCAGAGGAATCTCATCCTC
CTACATCCACAGCTGCTTCTCCTTGTAGACCAAATACACCTGGGAGAGGAGAGTCCCTTGGAGACAGCAGCGAGCTTCTT
CCATAATGTGGATGTTCCTTTTGAGGAGACTGTGGTAGATGGTGTCCATGGGGCTTTCATCAGGCAGAGAGATGGTCTCT
ATAAAATGTACTGGATGGACGATACTGGCTACAGCGAGAAAGCAACCTTTGCCTCAGTGACATATCCTCGGGGCTATCCC
TACAATGGGACAAACTATGTGAATGTCACCATGCACCTCCGAAGTCCCATCACCAGGGCAGCTTACCTCTTCATAGGGCC
ATCTATAGATGTTCAGAGCTTCACTGTCCACGGAGACTCTCAGCAACTGGATGTGTTCATAGCCACCAGCAAACATGCCT
ACGCCACATACCTGTGGACAGGTGAGGCCACAGGACAGTCTGCCTTTGCACAGGTCATTGCTGATCGTCACAAAATTCTG
TTTGACCGGAATTCAGCCATCAAGAGCAGCATTGTCCCTGAGGTGAAGGACTATGCTGCTATTGTGGAACAGAACTTGCA
GCATTTTAAACCAGTGTTTCAGCTGCTGGAGAAGCAGATACTGTCCCGAGTCCGGAACACAGCTAGCTTTAGGAAGACTG
CTGAACGCCTGCTGAGATTTTCAGATAAGAGACAGACTGAGGAGGCCATTGACAGGATTTTTGCCATATCACAGCAACAG
CAGCAGCAAAGCAAGTCAAAGAAAAACCGAAGGGCAGGCAAACGCTATAAATTTGTGGATGCTGTCCCTGATATTTTTGC
ACAGATTGAAGTCAATGAGAAAAAGATTAGACAGAAAGCTCAGATTTTGGCACAGAAAGAACTACCCATAGATGAAGATG
AAGAAATGAAAGACCTTTTAGATTTTGCAGATGTAACATACGAGAAACATAAAAATGGGGGCTTGATTAAAGGCCGGTTT
GGACAGGCACGGATGGTGACAACTACACACAGCAGGGCCCCATCACTGTCTGCTTCCTATACCAGGTTGTTCCTGATTCT
GAACATTGCTATTTTCTTTGTCATGTTGGCAATGCAACTGACTTATTTCCAGAGGGCCCAGAGCCTACATGGCCAAAGAT
GTCTTTATGCAGTTCTTCTCATAGATAGCTGTATTTTATTATGGTTGTACTCTTCTTGTTCCCAATCACAGTGTTAG

Library Parental gene expression (RPM)
bodymap2_adipose 108 .89 RPM
bodymap2_adrenal 50 .09 RPM
bodymap2_brain 24 .35 RPM
bodymap2_breast 61 .56 RPM
bodymap2_colon 67 .87 RPM
bodymap2_heart 23 .28 RPM
bodymap2_kidney 45 .56 RPM
bodymap2_liver 11 .96 RPM
bodymap2_lung 72 .91 RPM
bodymap2_lymph_node 97 .78 RPM
bodymap2_ovary 103 .03 RPM
bodymap2_prostate 52 .55 RPM
bodymap2_skeletal_muscle 11 .33 RPM
bodymap2_testis 46 .93 RPM
bodymap2_thyroid 29 .58 RPM
bodymap2_white_blood_cells 63 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013791 ortholog_one2one 1 retrogene
retro_acar_15,
Callithrix jacchus ENSCJAG00000004530 ortholog_one2one 1 retrogene
retro_cjac_1174,
Gorilla gorilla ENSGGOG00000026746 ortholog_one2one 2 retrogenes
retro_ggor_1419, retro_ggor_2802,
Nomascus leucogenys ENSNLEG00000013106 ortholog_one2one 1 retrogene
retro_nleu_2476,
Pongo abelii ENSPPYG00000016948 ortholog_one2one 2 retrogenes
retro_pabe_3418, retro_pabe_3517,
Pan troglodytes ENSPTRG00000018529 ortholog_one2one 1 retrogene
retro_ptro_2833,
Sorex araneus ENSSARG00000010799 ortholog_one2one 1 retrogene
retro_sara_560,
Takifugu rubripes ENSTRUG00000006239 ortholog_one2one 1 retrogene
retro_trub_32,
Xenopus tropicalis ENSXETG00000032776 ortholog_one2one 1 retrogene
retro_xtro_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4178 87.51 99.90
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Download FASTA sequences of all ENSG00000111817 retrocopies