Parental gene: | SNX19, ENSG00000120451 |
| Aliases: | SNX19, CHET8 |
| Description: | sorting nexin 19 [Source:HGNC Symbol;Acc:21532] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:130745330..130786404(-) |
>ENSG00000120451
ATGAAGACAGAAACAGTGCCACCGTTCCAGGAAACTCCAGCTGGATCGAGCTGTCACCTCAATAACCTGTTGAGTAGCCG
GAAGCTGATGGCTGTGGGGGTCTTGCTTGGCTGGCTCCTGGTCATACACCTTCTGGTCAACGTGTGGCTGCTGTGCCTTC
TGTCGGCATTGCTAGTGGTGCTGGGAGGATGGCTGGGCTCCAGCCTCGCTGGAGTGGCTTCAGGTCGACTGCATCTGGAA
CGCTTCATCCCGTTGGCCACCTGTCCTCCATGCCCTGAGGCAGAAAGGCAGCTGGAACGGGAGATCAACCGCACCATCCA
GATGATTATTCGAGATTTTGTGTTATCTTGGTACCGTTCCGTGAGCCAGGAGCCAGCCTTTGAGGAAGAAATGGAGGCAG
CCATGAAAGGGTTGGTCCAGGAGCTTCGGAGAAGGATGAGCGTGATGGACAGTCATGCTGTTGCCCAGAGTGTTCTGACT
CTCTGCGGTTGTCACCTGCAGAGCTACATTCAGGCAAAGGAGGCCACTGCAGGGAAGAATGGTCCAGTTGAGCCTTCCCA
CCTCTGGGAGGCTTACTGCCGGGCGACTGCCCCACATCCTGCTGTGCACAGCCCCAGTGCTGAAGTCACCTATACGCGTG
GCGTTGTGAATTTGTTGCTTCAAGGGCTGGTGCCCAAGCCCCACTTGGAGACTCGTACCGGACGCCATGTAGTGGTCGAA
CTCATCACATGCAATGTAATCTTACCACTGATCAGCAGGCTGTCAGATCCTGACTGGATCCACCTTGTACTCGTGGGTAT
CTTTTCCAAGGCCAGAGATCCAGCACCCTGCCCAGCCAGTGCCCCCGAACAGCCCTCAGTGCCGACATCTCTGCCACTGA
TTGCTGAGGTAGAGCAGCTTCCAGAAGGGAGAGCTTCTCCAGTAGCAGCCCCAGTATTCCTAAGTTACAGTGAGCCAGAG
GGTTCTGCAGGCCCCTCTCCAGAGGTTGAAGAAGGCCACGAAGCTGTAGAGGGAGATTTGGGTGGGATGTGTGAAGAAAG
AAAAGTAGGAAACAACTCATCTCATTTCCTACAGCCAAATGTTCGAGGTCCCCTGTTCTTATGTGAAGACTCAGAGCTGG
AGTCTCCGCTGTCTGAACTGGGCAAAGAAACCATCATGCTCATGACTCCAGGCAGCTTTCTCTCTGACAGGATTCAGGAT
GCCCTGTGTGCCCTAGAGAGTTCCCAGGCTCTGGAACCCAAAGATGGTGAGGCATCTGAAGGAGCAGAGGCTGAGGAGGG
TCCAGGGACAGAAACAGAGACAGGCCTGCCGGTCTCCACACTGAATTCCTGCCCAGAGATCCATATTGACACAGCAGACA
AGGAGATAGAACAAGGAGATGTTACCGCCTCTGTTACAGCTTTGCTGGAGGGGCCAGAAAAGACCTGCCCCTCACGGCCG
TCATGCTTAGAGAAGGATCTCACCAATGATGTGAGCTCCCTTGATCCTACTCTGCCACCAGTTCTGCTTTCCTCCTCTCC
ACCTGGTCCTCTCAGCTCAGCCACCTTCAGCTTTGAGCCCCTAAGCAGTCCCGATGGTCCAGTTATCATCCAGAACCTTC
GTATCACTGGCACCATTACAGCCCGAGAGCACAGTGGCACTGGATTCCACCCATACACACTCTATACTGTGAAGTACGAG
ACAGCCCTTGACGGTGAAAACAGCAGCGGCCTGCAGCAGCTGGCCTACCACACTGTGAATCGTCGCTATCGGGAGTTCTT
GAATCTGCAGACCCGTCTGGAGGAGAAACCAGATCTACGAAAGTTCATCAAAAATGTGAAGGGTCCTAAAAAGCTCTTTC
CAGATCTTCCATTGGGAAACATGGACAGTGACAGAGTAGAAGCCCGTAAGAGCCTCCTAGAATCATTCCTAAAGCAACTC
TGTGCCATTCCGGAGATCGCTAACAGTGAGGAGGTGCAGGAGTTCCTTGCTCTGAACACAGATGCTCGTATTGCCTTTGT
CAAGAAACCATTTATGGTCTCTAGAATAGACAAGATGGTGGTGAGTGCCATTGTGGACACCTTGAAGACAGCGTTTCCTC
GCTCTGAACCCCAGAGCCCCACAGAGGAGCTGAGTGAGGCCGAGACCGAAAGCAAGCCCCAGACAGAAGGCAAGAAGGCT
AGCAAGTCTAGGCTGAGGTTCTCATCCAGTAAAATTTCTCCAGCACTAAGTGTGACTGAAGCACAAGACAAGATTCTTTA
TTGTCTCCAGGAAGGCAATGTGGAGTCTGAGACTCTATCCATGTCTGCGATGGAATCTTTTATTGAAAAACAGACAAAGT
TACTGGAAATGCAGCCAACAAAAGCCCCAGAAAAAGATCCTGAACAACCTCCCAAAGGACGTGTGGACAGTTGCGTGTCA
GATGCAGCCGTGCCAGCCCAAGACCCCAGCAACAGCGATCCAGGAACAGAGACAGAGTTAGCTGACACAGCCCTGGATCT
GCTCCTCTTGCTACTAACAGAACAGTGGAAATGGCTATGTACCGAAAACATGCAAAAGTTTCTTCGTCTTATCTTTGGGA
CCCTAGTTCAAAGGTGGCTAGAGGTGCAGGTAGCTAATTTAACAAGTCCACAGCGCTGGGTGCAGTACCTCCTGCTTCTT
CAGGAGTCCATCTGGCCTGGTGGAGTTTTGCCTAAGTTTCCACGGCCCGTAAGGACCCAAGAGCAGAAACTGGCTGCTGA
GAAACAGGCTTTGCAGAGCCTGATGGGAGTCCTCCCAGATCTCGTAGTAGAAATTCTTGGGGTGAACAAATGCCGGCTGA
GCTGGGGTCTAGTCCTGGAGTCACTACAACAACCCCTCATCAACAGGCATTTGATTTACTGCCTTGGGGACATCATCCTG
GAATTCTTGGATCTCAGTGCCTCTGTTGAGGAGTCTGCTGCTACCACCTCTGCCTCAGATACCCCAGGCAACTCTAAGAG
GATGGGTGTCTCCTCTTAG
ATGAAGACAGAAACAGTGCCACCGTTCCAGGAAACTCCAGCTGGATCGAGCTGTCACCTCAATAACCTGTTGAGTAGCCG
GAAGCTGATGGCTGTGGGGGTCTTGCTTGGCTGGCTCCTGGTCATACACCTTCTGGTCAACGTGTGGCTGCTGTGCCTTC
TGTCGGCATTGCTAGTGGTGCTGGGAGGATGGCTGGGCTCCAGCCTCGCTGGAGTGGCTTCAGGTCGACTGCATCTGGAA
CGCTTCATCCCGTTGGCCACCTGTCCTCCATGCCCTGAGGCAGAAAGGCAGCTGGAACGGGAGATCAACCGCACCATCCA
GATGATTATTCGAGATTTTGTGTTATCTTGGTACCGTTCCGTGAGCCAGGAGCCAGCCTTTGAGGAAGAAATGGAGGCAG
CCATGAAAGGGTTGGTCCAGGAGCTTCGGAGAAGGATGAGCGTGATGGACAGTCATGCTGTTGCCCAGAGTGTTCTGACT
CTCTGCGGTTGTCACCTGCAGAGCTACATTCAGGCAAAGGAGGCCACTGCAGGGAAGAATGGTCCAGTTGAGCCTTCCCA
CCTCTGGGAGGCTTACTGCCGGGCGACTGCCCCACATCCTGCTGTGCACAGCCCCAGTGCTGAAGTCACCTATACGCGTG
GCGTTGTGAATTTGTTGCTTCAAGGGCTGGTGCCCAAGCCCCACTTGGAGACTCGTACCGGACGCCATGTAGTGGTCGAA
CTCATCACATGCAATGTAATCTTACCACTGATCAGCAGGCTGTCAGATCCTGACTGGATCCACCTTGTACTCGTGGGTAT
CTTTTCCAAGGCCAGAGATCCAGCACCCTGCCCAGCCAGTGCCCCCGAACAGCCCTCAGTGCCGACATCTCTGCCACTGA
TTGCTGAGGTAGAGCAGCTTCCAGAAGGGAGAGCTTCTCCAGTAGCAGCCCCAGTATTCCTAAGTTACAGTGAGCCAGAG
GGTTCTGCAGGCCCCTCTCCAGAGGTTGAAGAAGGCCACGAAGCTGTAGAGGGAGATTTGGGTGGGATGTGTGAAGAAAG
AAAAGTAGGAAACAACTCATCTCATTTCCTACAGCCAAATGTTCGAGGTCCCCTGTTCTTATGTGAAGACTCAGAGCTGG
AGTCTCCGCTGTCTGAACTGGGCAAAGAAACCATCATGCTCATGACTCCAGGCAGCTTTCTCTCTGACAGGATTCAGGAT
GCCCTGTGTGCCCTAGAGAGTTCCCAGGCTCTGGAACCCAAAGATGGTGAGGCATCTGAAGGAGCAGAGGCTGAGGAGGG
TCCAGGGACAGAAACAGAGACAGGCCTGCCGGTCTCCACACTGAATTCCTGCCCAGAGATCCATATTGACACAGCAGACA
AGGAGATAGAACAAGGAGATGTTACCGCCTCTGTTACAGCTTTGCTGGAGGGGCCAGAAAAGACCTGCCCCTCACGGCCG
TCATGCTTAGAGAAGGATCTCACCAATGATGTGAGCTCCCTTGATCCTACTCTGCCACCAGTTCTGCTTTCCTCCTCTCC
ACCTGGTCCTCTCAGCTCAGCCACCTTCAGCTTTGAGCCCCTAAGCAGTCCCGATGGTCCAGTTATCATCCAGAACCTTC
GTATCACTGGCACCATTACAGCCCGAGAGCACAGTGGCACTGGATTCCACCCATACACACTCTATACTGTGAAGTACGAG
ACAGCCCTTGACGGTGAAAACAGCAGCGGCCTGCAGCAGCTGGCCTACCACACTGTGAATCGTCGCTATCGGGAGTTCTT
GAATCTGCAGACCCGTCTGGAGGAGAAACCAGATCTACGAAAGTTCATCAAAAATGTGAAGGGTCCTAAAAAGCTCTTTC
CAGATCTTCCATTGGGAAACATGGACAGTGACAGAGTAGAAGCCCGTAAGAGCCTCCTAGAATCATTCCTAAAGCAACTC
TGTGCCATTCCGGAGATCGCTAACAGTGAGGAGGTGCAGGAGTTCCTTGCTCTGAACACAGATGCTCGTATTGCCTTTGT
CAAGAAACCATTTATGGTCTCTAGAATAGACAAGATGGTGGTGAGTGCCATTGTGGACACCTTGAAGACAGCGTTTCCTC
GCTCTGAACCCCAGAGCCCCACAGAGGAGCTGAGTGAGGCCGAGACCGAAAGCAAGCCCCAGACAGAAGGCAAGAAGGCT
AGCAAGTCTAGGCTGAGGTTCTCATCCAGTAAAATTTCTCCAGCACTAAGTGTGACTGAAGCACAAGACAAGATTCTTTA
TTGTCTCCAGGAAGGCAATGTGGAGTCTGAGACTCTATCCATGTCTGCGATGGAATCTTTTATTGAAAAACAGACAAAGT
TACTGGAAATGCAGCCAACAAAAGCCCCAGAAAAAGATCCTGAACAACCTCCCAAAGGACGTGTGGACAGTTGCGTGTCA
GATGCAGCCGTGCCAGCCCAAGACCCCAGCAACAGCGATCCAGGAACAGAGACAGAGTTAGCTGACACAGCCCTGGATCT
GCTCCTCTTGCTACTAACAGAACAGTGGAAATGGCTATGTACCGAAAACATGCAAAAGTTTCTTCGTCTTATCTTTGGGA
CCCTAGTTCAAAGGTGGCTAGAGGTGCAGGTAGCTAATTTAACAAGTCCACAGCGCTGGGTGCAGTACCTCCTGCTTCTT
CAGGAGTCCATCTGGCCTGGTGGAGTTTTGCCTAAGTTTCCACGGCCCGTAAGGACCCAAGAGCAGAAACTGGCTGCTGA
GAAACAGGCTTTGCAGAGCCTGATGGGAGTCCTCCCAGATCTCGTAGTAGAAATTCTTGGGGTGAACAAATGCCGGCTGA
GCTGGGGTCTAGTCCTGGAGTCACTACAACAACCCCTCATCAACAGGCATTTGATTTACTGCCTTGGGGACATCATCCTG
GAATTCTTGGATCTCAGTGCCTCTGTTGAGGAGTCTGCTGCTACCACCTCTGCCTCAGATACCCCAGGCAACTCTAAGAG
GATGGGTGTCTCCTCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 48 .69 RPM |
| bodymap2_lung | 35 .25 RPM |
| bodymap2_breast | 94 .16 RPM |
| bodymap2_adipose | 83 .09 RPM |
| bodymap2_adrenal | 72 .46 RPM |
| bodymap2_skeletal_muscle | 73 .95 RPM |
| bodymap2_thyroid | 130 .80 RPM |
| bodymap2_prostate | 82 .98 RPM |
| bodymap2_colon | 62 .07 RPM |
| bodymap2_testis | 129 .65 RPM |
| bodymap2_brain | 76 .88 RPM |
| bodymap2_heart | 67 .44 RPM |
| bodymap2_white_blood_cells | 71 .55 RPM |
| bodymap2_lymph_node | 74 .78 RPM |
| bodymap2_ovary | 127 .67 RPM |
| bodymap2_kidney | 77 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000004069 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004487 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1235 | 85.79 | 55.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1919 | 86.30 | 83.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000120451 retrocopies