Parental gene:

CLTA, ENSG00000122705

Aliases:CLTA, LCA
Description:clathrin, light chain A [Source:HGNC Symbol;Acc:2090]
Organism:Human (Homo sapiens)
Coordinates:9:36190852..36304778(+)


>ENSG00000122705
ATGGCTGAGCTGGATCCGTTCGGCGCCCCTGCCGGCGCCCCTGGCGGTCCCGCGCTGGGGAACGGAGTGGCCGGCGCCGG
CGAAGAAGACCCGGCTGCGGCCTTCTTGGCGCAGCAAGAGAGCGAGATTGCGGGCATCGAGAACGACGAGGCCTTCGCCA
TCCTGGACGGCGGCGCCCCCGGGCCCCAGCCGCACGGCGAGCCGCCGGGGGGTCCGGATGCTGTTGATGGAGTAATGAAT
GGTGAATACTACCAGGAAAGTAATGGTCCAACAGACAGTTATGCAGCTATTTCACAAGTGGATCGATTGCAGTCAGAGCC
TGAAAGTATCCGTAAATGGAGAGAAGAACAAATGGAACGCTTGGAAGCCCTTGATGCCAATTCTCGGAAGCAAGAAGCAG
AGTGGAAAGAAAAGGCAATAAAGGAGCTAGAAGAATGGTATGCAAGACAGGACGAGCAGCTACAGAAAACAAAAGCAAAC
AACAGGGTGGCAGATGAAGCTTTCTACAAACAACCCTTCGCTGACGTGATTGGTTATGTCACAAACATAAACCATCCTTG
CTACAGCCTAGAACAGGCAGCAGAAGAAGCCTTTGTAAATGACATTGACGAGTCGTCCCCAGGCACTGAGTGGGAACGGG
TGGCCCGGCTGTGTGACTTTAACCCCAAGTCTAGCAAGCAGGCCAAAGATGTCTCCCGCATGCGCTCAGTCCTCATCTCC
CTCAAGCAGGCCCCGCTGGTGCACTGA

Library Parental gene expression (RPM)
bodymap2_adipose 76 .25 RPM
bodymap2_adrenal 93 .07 RPM
bodymap2_brain 97 .00 RPM
bodymap2_breast 74 .98 RPM
bodymap2_colon 93 .88 RPM
bodymap2_heart 19 .86 RPM
bodymap2_kidney 91 .26 RPM
bodymap2_liver 46 .15 RPM
bodymap2_lung 69 .57 RPM
bodymap2_lymph_node 69 .33 RPM
bodymap2_ovary 113 .31 RPM
bodymap2_prostate 101 .79 RPM
bodymap2_skeletal_muscle 26 .39 RPM
bodymap2_testis 98 .19 RPM
bodymap2_thyroid 104 .17 RPM
bodymap2_white_blood_cells 68 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001137 ortholog_one2one 1 retrogene
retro_btau_327,
Macropus eugenii ENSMEUG00000010858 ortholog_one2one 1 retrogene
retro_meug_480,
Macaca mulatta ENSMMUG00000006132 ortholog_one2one 2 retrogenes
retro_mmul_2319, retro_mmul_785,
Monodelphis domestica ENSMODG00000002610 ortholog_one2one 1 retrogene
retro_mdom_1148,
Nomascus leucogenys ENSNLEG00000003874 ortholog_one2one 1 retrogene
retro_nleu_659,
Pongo abelii ENSPPYG00000019069 ortholog_one2one 1 retrogene
retro_pabe_3300,
Pan troglodytes ENSPTRG00000020930 ortholog_one2one 1 retrogene
retro_ptro_2727,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_955 80.70 77.98
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2. retro_hsap_4022 71.43 100.00
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Download FASTA sequences of all ENSG00000122705 retrocopies